Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5d09
         (431 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063134-1|AAH63134.1|  844|Homo sapiens CMYA5 protein protein.        29   6.8  
AF177292-1|AAD55265.1|  808|Homo sapiens genethonin 3 protein.         29   6.8  
AK127339-1|BAC86936.1|  286|Homo sapiens protein ( Homo sapiens ...    29   9.0  

>BC063134-1|AAH63134.1|  844|Homo sapiens CMYA5 protein protein.
          Length = 844

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 210 MNESKSLQADDLDSQSANKSINPKARDPILFKMAAKLNGRRPKQKREGPSLKTKAP 377
           + ESK +Q+  +D     K  +P+ + P   K  + ++ R P Q  E P +    P
Sbjct: 248 LEESKMVQSKVIDDADEGKKPSPEVKIPTQRKPISSIHAREP-QSPESPEVTQNPP 302


>AF177292-1|AAD55265.1|  808|Homo sapiens genethonin 3 protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 210 MNESKSLQADDLDSQSANKSINPKARDPILFKMAAKLNGRRPKQKREGPSLKTKAP 377
           + ESK +Q+  +D     K  +P+ + P   K  + ++ R P Q  E P +    P
Sbjct: 367 LEESKMVQSKVIDDADEGKKPSPEVKIPTQRKPISSIHAREP-QSPEAPEVTQNPP 421


>AK127339-1|BAC86936.1|  286|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45410 fis, clone BRHIP3032311. ).
          Length = 286

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -3

Query: 381 CVGPWSSNSGPLVSAWVYGHLAS 313
           C G W     P VS WV GHL S
Sbjct: 153 CSGGWGCVPVPAVSPWVAGHLLS 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,185,037
Number of Sequences: 237096
Number of extensions: 1131485
Number of successful extensions: 2421
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2421
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)