Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5d08
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    27   0.15 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.2  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 21/76 (27%), Positives = 39/76 (51%)
 Frame = +3

Query: 306 PALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVLAMG 485
           PALQ  ++LI     ++      L  L E +  +K  Y K+TD K K+F   +  +L++G
Sbjct: 50  PALQYCTHLIY-GYAAIDEETYKLTPLNEQFDVIKDNYRKVTDLK-KRF-PKLKVLLSVG 106

Query: 486 VSGTLEVAEKRECLKY 533
            +  +   ++ + +KY
Sbjct: 107 GNADVSGQDEEKNIKY 122


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 571 PQSPTFDNVPRRQYFKHSLFSATSRVPLTPI 479
           P  P   N+    Y  HS++ +++ +PL  I
Sbjct: 334 PNLPLTHNIAHNPYPSHSIYPSSNLMPLNNI 364


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 201 KMSASSATSEEDKRLQEELNML 266
           KM   S TSEE ++  +E+N++
Sbjct: 483 KMLKESPTSEEIRQFTQEINIM 504


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +3

Query: 432 DEKT--KKFCADVISVLAMGVSGTLEVAEKRECLK 530
           D KT  KK+  D+IS  A G++      +  E LK
Sbjct: 165 DVKTAMKKYSVDIISTCAFGINTYCFRNDNSEILK 199


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 261 YSIPPVGVCLPRTLQSWHSFS 199
           YS+ P G    + L+S HSFS
Sbjct: 225 YSLTPQGRKEQKVLKSLHSFS 245


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 261 YSIPPVGVCLPRTLQSWHSFS 199
           YS+ P G    + L+S HSFS
Sbjct: 225 YSLTPQGRKEQKVLKSLHSFS 245


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 384 LREHYPALKQVYEKI 428
           L EH   L+QV+EK+
Sbjct: 468 LNEHLEHLRQVFEKL 482


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 639 MNPCFLYSILQQF 601
           + P F +SILQQF
Sbjct: 137 LTPAFHFSILQQF 149


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 639 MNPCFLYSILQQF 601
           + P F +SILQQF
Sbjct: 137 LTPAFHFSILQQF 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,496
Number of Sequences: 336
Number of extensions: 3585
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)