Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5d08
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein. 167 3e-41
BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome, ma... 167 3e-41
BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome, ma... 167 3e-41
BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome, ma... 167 3e-41
BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome, ma... 167 3e-41
AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPa... 167 3e-41
D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subu... 165 1e-40
U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor typ... 149 1e-35
>X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein.
Length = 900
Score = 167 bits (406), Expect = 3e-41
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Frame = +3
Query: 225 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 404
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 37 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 96
Query: 405 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 584
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 97 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 150
Query: 585 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAE 692
R L GE+A+EW + E + + LL LV++++ ++M H+AE
Sbjct: 151 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAE 192
>BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 167 bits (406), Expect = 3e-41
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Frame = +3
Query: 225 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 404
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 405 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 584
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 585 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAE 692
R L GE+A+EW + E + + LL LV++++ ++M H+AE
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAE 201
>BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 167 bits (406), Expect = 3e-41
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Frame = +3
Query: 225 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 404
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 405 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 584
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 585 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAE 692
R L GE+A+EW + E + + LL LV++++ ++M H+AE
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAE 201
>BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 167 bits (406), Expect = 3e-41
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Frame = +3
Query: 225 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 404
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 405 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 584
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 585 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAE 692
R L GE+A+EW + E + + LL LV++++ ++M H+AE
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAE 201
>BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 167 bits (406), Expect = 3e-41
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Frame = +3
Query: 225 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 404
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 405 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 584
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 585 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAE 692
R L GE+A+EW + E + + LL LV++++ ++M H+AE
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAE 201
>AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPase
subunit 2 variant protein.
Length = 913
Score = 167 bits (406), Expect = 3e-41
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Frame = +3
Query: 225 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 404
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 51 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 110
Query: 405 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 584
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 111 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 164
Query: 585 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAE 692
R L GE+A+EW + E + + LL LV++++ ++M H+AE
Sbjct: 165 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAE 206
>D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subunit
p97 protein.
Length = 908
Score = 165 bits (402), Expect = 1e-40
Identities = 84/162 (51%), Positives = 114/162 (70%), Gaps = 6/162 (3%)
Frame = +3
Query: 225 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 404
SEEDK+LQ+EL ML ++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLAERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 405 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 584
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 585 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAE 692
R L GE+A+EW + E + + LL LV++++ ++M H+AE
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAE 201
>U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor type 1
receptor associated protein protein.
Length = 853
Score = 149 bits (360), Expect = 1e-35
Identities = 76/150 (50%), Positives = 104/150 (69%), Gaps = 6/150 (4%)
Frame = +3
Query: 261 MLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEK 440
MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY LK++YE + +
Sbjct: 1 MLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGE 60
Query: 441 TKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEW- 617
K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYVR L GE+A+EW
Sbjct: 61 NKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQ 114
Query: 618 ---NIENM--DSLLPLVRDVITFDMKHSAE 692
+ E + + LL LV++++ ++M H+AE
Sbjct: 115 ELDDAEKVQREPLLTLVKEIVPYNMAHNAE 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,157,409
Number of Sequences: 237096
Number of extensions: 1964723
Number of successful extensions: 4581
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4573
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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