Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5c24
(680 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 26 1.3
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 25 2.2
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 24 5.1
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 24 5.1
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 23 6.7
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 23 6.7
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 23 6.7
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 23 6.7
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 23 8.9
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 23 8.9
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 23 8.9
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 8.9
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 8.9
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 8.9
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 25.8 bits (54), Expect = 1.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 353 HNAELSKSLG-SMWKNLSE-EEKLPFIKEADKLRTQHKKQHPDY 478
H+A+ S+ SM NL+ E + +ADKL K+HP+Y
Sbjct: 486 HDAQYYDSISVSMTYNLARLYEAMAVFDKADKLYKDILKEHPNY 529
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 666 GTGLGSRYWSNSVPSGGPSISKAADISGMPEKSMWFR 556
GT G +SN + S GPS++ + +W R
Sbjct: 537 GTNAGKTTFSNIIGSSGPSVTSCTGSEIDKQVGLWER 573
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 23.8 bits (49), Expect = 5.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 334 RQTAAHRLREHHECIHRSLDVWTTHTPTTFRWLRQY 227
+Q R+REH+E I R L PT F +R +
Sbjct: 899 KQDQLARMREHYEQIQRELKD-KLKRPTPFERMRSF 933
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.8 bits (49), Expect = 5.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 223 IVVKYFHEFSDGLVY 179
+V KYF +F DG Y
Sbjct: 1060 LVKKYFEDFEDGFAY 1074
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 23.4 bits (48), Expect = 6.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 124 GSDHELGPGARQVRGQAGDKRGRRKTR 204
G D G G R RG G RGR + R
Sbjct: 59 GGDDGYGGGGRGGRGGRGGGRGRGRGR 85
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 648 RYWSNSVPSGGPSISKAADISGMPE 574
RYWSN +G P+ + A+ S PE
Sbjct: 631 RYWSNFAKTGNPNPNTAS--SEFPE 653
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 648 RYWSNSVPSGGPSISKAADISGMPE 574
RYWSN +G P+ + A+ S PE
Sbjct: 631 RYWSNFAKTGNPNPNTAS--SEFPE 653
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 648 RYWSNSVPSGGPSISKAADISGMPE 574
RYWSN +G P+ + A+ S PE
Sbjct: 517 RYWSNFAKTGNPNPNTAS--SEFPE 539
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 23.0 bits (47), Expect = 8.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 539 RESSPDRNHIDFSGMPEISAALLMDGPPDGTEL 637
R SP R + S M EI A+ + PP +L
Sbjct: 379 RSPSPQRGNQSLSQMTEILEAIQPEFPPTPPQL 411
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.0 bits (47), Expect = 8.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 411 RSCLSLKKQISYERNIKNSTRITNTNLDVES---HR*LQLQPRESNGNHLL 554
R C+ LK + N+KN I TNL VE L+ +P+E G +L
Sbjct: 54 RVCIKLKLSQLIDVNLKNQ--IMTTNLWVEQSWYDYKLRWEPKEYGGVQML 102
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.0 bits (47), Expect = 8.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 411 RSCLSLKKQISYERNIKNSTRITNTNLDVES---HR*LQLQPRESNGNHLL 554
R C+ LK + N+KN I TNL VE L+ +P+E G +L
Sbjct: 54 RVCIKLKLSQLIDVNLKNQ--IMTTNLWVEQSWYDYKLRWEPKEYGGVQML 102
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.0 bits (47), Expect = 8.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 255 PPPFVGCGSIVS*SNIFTS 199
PPP G G + SN+ TS
Sbjct: 1262 PPPLSGTGQTTTNSNLLTS 1280
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.0 bits (47), Expect = 8.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 255 PPPFVGCGSIVS*SNIFTS 199
PPP G G + SN+ TS
Sbjct: 1258 PPPLSGTGQTTTNSNLLTS 1276
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 170 CPRTCRAPGPNSWSLPTIE 114
CP C NSWS +E
Sbjct: 794 CPNNCACYHDNSWSTNIVE 812
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,791
Number of Sequences: 2352
Number of extensions: 20073
Number of successful extensions: 31
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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