Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5c19
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.85 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.4  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   6.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 245 IVYNLKTKTLTMYN-ERIRAALNRPARFNDQTTNVNIAY 358
           + Y +  + +  YN ER+   L R  RFND    +  AY
Sbjct: 231 LFYYMHQQIIARYNFERLCNKLKRATRFNDFNEAIKEAY 269


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 151 DYKCGQQHTA*QHV*NNVSKSRF*KFRLQYTDCVQFKNKNFNNVQ 285
           D KC   +T  Q   + + +S F    L +  C   + + FNN Q
Sbjct: 476 DVKCVSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNYQ 520


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 238 IVVEIFKIGFLKHCSKRVVKR 176
           I+   F+ GF K C  ++VK+
Sbjct: 355 IISSKFRSGFFKLCGMKIVKK 375


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 173 CCWPHL*SIPSTLTNGALETL 111
           CCW    SIP  + N    TL
Sbjct: 13  CCWGKSLSIPQQILNEFKSTL 33


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 618 TFLDLCGGPGEFANYTMSLNPL 683
           ++LD+ GG  + ANY+   + L
Sbjct: 197 SWLDMSGGMHQMANYSTDYSSL 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,662
Number of Sequences: 336
Number of extensions: 4140
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)