Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5c19
         (746 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023584-1|AAH23584.1|  329|Homo sapiens FtsJ homolog 1 (E. coli...    32   1.9  
AJ005892-1|CAA06749.1|  329|Homo sapiens JM23 protein.                 32   1.9  
AF063015-1|AAC33734.1|  327|Homo sapiens cell division protein p...    32   1.9  
BC112107-1|AAI12108.1|  501|Homo sapiens tetratricopeptide repea...    32   2.5  
BC105128-1|AAI05129.1|  501|Homo sapiens tetratricopeptide repea...    32   2.5  
BC073796-1|AAH73796.1|  384|Homo sapiens TTC19 protein protein.        32   2.5  
BC011698-1|AAH11698.2|  382|Homo sapiens TTC19 protein protein.        32   2.5  
AK025958-1|BAB15296.1|  157|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AK000350-1|BAA91103.1|  273|Homo sapiens protein ( Homo sapiens ...    32   2.5  
BC035230-1|AAH35230.2|  409|Homo sapiens zinc finger, DHHC-type ...    31   5.8  
BC031265-1|AAH31265.1|  305|Homo sapiens tetraspanin 12 protein.       30   7.7  
AY358703-1|AAQ89066.1|  305|Homo sapiens NET-2 protein.                30   7.7  
AF124522-1|AAD17317.1|  305|Homo sapiens tetraspan NET-2 protein.      30   7.7  
AC004456-1|AAQ96879.1|  305|Homo sapiens unknown protein.              30   7.7  

>BC023584-1|AAH23584.1|  329|Homo sapiens FtsJ homolog 1 (E. coli)
           protein.
          Length = 329

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 552 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFA 656
           R R   KLL++DK+F + + V   +DLC  PG ++
Sbjct: 22  RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWS 56


>AJ005892-1|CAA06749.1|  329|Homo sapiens JM23 protein.
          Length = 329

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 552 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFA 656
           R R   KLL++DK+F + + V   +DLC  PG ++
Sbjct: 22  RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWS 56


>AF063015-1|AAC33734.1|  327|Homo sapiens cell division protein
           protein.
          Length = 327

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 552 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFA 656
           R R   KLL++DK+F + + V   +DLC  PG ++
Sbjct: 22  RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWS 56


>BC112107-1|AAI12108.1|  501|Homo sapiens tetratricopeptide repeat
           domain 19 protein.
          Length = 501

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 513 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 626
           CAR  LF K+P++  R + K L+I ++    RH  T +
Sbjct: 364 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 401


>BC105128-1|AAI05129.1|  501|Homo sapiens tetratricopeptide repeat
           domain 19 protein.
          Length = 501

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 513 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 626
           CAR  LF K+P++  R + K L+I ++    RH  T +
Sbjct: 364 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 401


>BC073796-1|AAH73796.1|  384|Homo sapiens TTC19 protein protein.
          Length = 384

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 513 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 626
           CAR  LF K+P++  R + K L+I ++    RH  T +
Sbjct: 247 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 284


>BC011698-1|AAH11698.2|  382|Homo sapiens TTC19 protein protein.
          Length = 382

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 513 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 626
           CAR  LF K+P++  R + K L+I ++    RH  T +
Sbjct: 245 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 282


>AK025958-1|BAB15296.1|  157|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22305 fis, clone HRC04991. ).
          Length = 157

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 513 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 626
           CAR  LF K+P++  R + K L+I ++    RH  T +
Sbjct: 20  CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 57


>AK000350-1|BAA91103.1|  273|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20343 fis, clone HEP13649. ).
          Length = 273

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 513 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 626
           CAR  LF K+P++  R + K L+I ++    RH  T +
Sbjct: 136 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 173


>BC035230-1|AAH35230.2|  409|Homo sapiens zinc finger, DHHC-type
           containing 23 protein.
          Length = 409

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 600 VCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 731
           +CR    F  L   PG +ANY+ +L+  C  Y V +T     ++
Sbjct: 326 ICRDRSVFTALFYCPGVYANYSSALSFTCVWYSVIITAGMAYIF 369


>BC031265-1|AAH31265.1|  305|Homo sapiens tetraspanin 12 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +3

Query: 327 TIKRPMLILPMYFCSLFVLFC 389
           T+KR +L+L  YF SL V+FC
Sbjct: 85  TVKRNLLLLAWYFGSLLVIFC 105


>AY358703-1|AAQ89066.1|  305|Homo sapiens NET-2 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +3

Query: 327 TIKRPMLILPMYFCSLFVLFC 389
           T+KR +L+L  YF SL V+FC
Sbjct: 85  TVKRNLLLLAWYFGSLLVIFC 105


>AF124522-1|AAD17317.1|  305|Homo sapiens tetraspan NET-2 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +3

Query: 327 TIKRPMLILPMYFCSLFVLFC 389
           T+KR +L+L  YF SL V+FC
Sbjct: 85  TVKRNLLLLAWYFGSLLVIFC 105


>AC004456-1|AAQ96879.1|  305|Homo sapiens unknown protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +3

Query: 327 TIKRPMLILPMYFCSLFVLFC 389
           T+KR +L+L  YF SL V+FC
Sbjct: 85  TVKRNLLLLAWYFGSLLVIFC 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,168,287
Number of Sequences: 237096
Number of extensions: 2108182
Number of successful extensions: 4692
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4684
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)