Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5c12
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   2.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   5.2  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   5.2  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   5.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   9.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   9.2  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 300 HYIKVDCRRHDSTNSISLSKTDNCCSSI 383
           H +K+  RR+  T ++ L +  N C  I
Sbjct: 300 HSLKIHLRRYGHTPNVVLDEEGNPCPDI 327



 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = +3

Query: 297 KHYIKVDCRRHDSTNSISLSKTDNCC 374
           KH+++   R H  +     +K D  C
Sbjct: 243 KHHLEYHLRNHAGSKPFQCNKCDYTC 268


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 136 FTALIVNIVGGAVLCMG 186
           + A++ +I+ GA+ C+G
Sbjct: 86  YPAIVADILSGAIACIG 102


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = +3

Query: 297 KHYIKVDCRRHDSTNSISLSKTDNCC 374
           KH+++   R H  +     +K D  C
Sbjct: 1   KHHLEYHLRNHAGSKPFQCNKCDYTC 26


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 263 EAAMLPAIIPDAL 225
           EAA+L  +IPDAL
Sbjct: 56  EAAILRDVIPDAL 68


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 263 EAAMLPAIIPDAL 225
           EAA+L  +IPDAL
Sbjct: 56  EAAILRDVIPDAL 68


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 372 SSYLFLTNLWSWCYHG 325
           SSYL   NL ++ +HG
Sbjct: 268 SSYLDFINLMAYDFHG 283


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 444 FFFSHLIIFISEFKTF*IQNVLTSSSYLFLTNLWSWCY 331
           +FF+   I  +  K F I N L   +      LW+  Y
Sbjct: 248 YFFTTGNIIATYDKQFYIHNALIVRALFLFFQLWATVY 285


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 444 FFFSHLIIFISEFKTF*IQNVLTSSSYLFLTNLWSWCY 331
           +FF+   I  +  K F I N L   +      LW+  Y
Sbjct: 244 YFFTTGNIIATYDKQFYIHNALIVRALFLFFQLWATVY 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,826
Number of Sequences: 336
Number of extensions: 2335
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)