Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5c02
(437 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00274-1|CAA68377.1| 758|Drosophila melanogaster finger protein... 36 0.018
U17742-1|AAB60232.1| 758|Drosophila melanogaster zinc finger DN... 36 0.018
BT024234-1|ABC86296.1| 758|Drosophila melanogaster LD14196p pro... 36 0.018
AE014297-790|AAF54270.1| 758|Drosophila melanogaster CG9786-PB,... 36 0.018
AE014297-789|AAN13395.1| 758|Drosophila melanogaster CG9786-PA,... 36 0.018
AY122093-1|AAM52605.1| 607|Drosophila melanogaster GH04589p pro... 29 2.1
AE014134-3148|AAF53836.1| 578|Drosophila melanogaster CG10366-P... 29 2.1
AE013599-113|AAF57305.2| 399|Drosophila melanogaster CG12754-PA... 29 2.1
AY075522-1|AAL68330.1| 148|Drosophila melanogaster RE70209p pro... 28 6.4
AE014298-2932|AAN09518.1| 148|Drosophila melanogaster CG33932-P... 28 6.4
>Y00274-1|CAA68377.1| 758|Drosophila melanogaster finger protein
protein.
Length = 758
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 341 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHENCSALFY 168
++ CPKC FVT + + +I HKN D+C + +N N+H + Y
Sbjct: 268 ILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKC--SYTCVNKSMLNSHRKSHSSVY 323
>U17742-1|AAB60232.1| 758|Drosophila melanogaster zinc finger
DNA-binding protein protein.
Length = 758
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 341 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHENCSALFY 168
++ CPKC FVT + + +I HKN D+C + +N N+H + Y
Sbjct: 268 ILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKC--SYTCVNKSMLNSHRKSHSSVY 323
>BT024234-1|ABC86296.1| 758|Drosophila melanogaster LD14196p
protein.
Length = 758
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 341 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHENCSALFY 168
++ CPKC FVT + + +I HKN D+C + +N N+H + Y
Sbjct: 268 ILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKC--SYTCVNKSMLNSHRKSHSSVY 323
>AE014297-790|AAF54270.1| 758|Drosophila melanogaster CG9786-PB,
isoform B protein.
Length = 758
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 341 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHENCSALFY 168
++ CPKC FVT + + +I HKN D+C + +N N+H + Y
Sbjct: 268 ILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKC--SYTCVNKSMLNSHRKSHSSVY 323
>AE014297-789|AAN13395.1| 758|Drosophila melanogaster CG9786-PA,
isoform A protein.
Length = 758
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 341 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHENCSALFY 168
++ CPKC FVT + + +I HKN D+C + +N N+H + Y
Sbjct: 268 ILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKC--SYTCVNKSMLNSHRKSHSSVY 323
>AY122093-1|AAM52605.1| 607|Drosophila melanogaster GH04589p
protein.
Length = 607
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -1
Query: 386 FKSTNNLS--KKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVIN 213
FKS N L K+ D + +CP+C +S ++ + +H + D C +F
Sbjct: 401 FKSANRLKHHKETHDPHKYICPECGMQLNSRTTLNRHRLVHTDQMQHKCDYCGREF--KR 458
Query: 212 SKSWNNH 192
+K+ NH
Sbjct: 459 AKALKNH 465
>AE014134-3148|AAF53836.1| 578|Drosophila melanogaster CG10366-PA
protein.
Length = 578
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -1
Query: 386 FKSTNNLS--KKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVIN 213
FKS N L K+ D + +CP+C +S ++ + +H + D C +F
Sbjct: 372 FKSANRLKHHKETHDPHKYICPECGMQLNSRTTLNRHRLVHTDQMQHKCDYCGREF--KR 429
Query: 212 SKSWNNH 192
+K+ NH
Sbjct: 430 AKALKNH 436
>AE013599-113|AAF57305.2| 399|Drosophila melanogaster CG12754-PA
protein.
Length = 399
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 419 NIDMLRSIIRRFKSTNNLSKKPSDHYVVLC 330
++DMLR IRR +S NLS+ S +V C
Sbjct: 218 HLDMLRERIRRLRSDENLSEAESYEELVKC 247
>AY075522-1|AAL68330.1| 148|Drosophila melanogaster RE70209p
protein.
Length = 148
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +3
Query: 252 FCVKIFMHFYVFSHAHFGRRHKITLWT*HYIMIGRLFAEIVCTLETSYD*SQHVNIFSP 428
FCV + + Y+ S+ H+ +W+ +++++ +F ++C +S ++ +FSP
Sbjct: 72 FCVIVGIRMYLDSNNKRKALHRF-MWSTYFLVLIAIFKYLLCLKLSSKTGLEYSEVFSP 129
>AE014298-2932|AAN09518.1| 148|Drosophila melanogaster CG33932-PA,
isoform A protein.
Length = 148
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +3
Query: 252 FCVKIFMHFYVFSHAHFGRRHKITLWT*HYIMIGRLFAEIVCTLETSYD*SQHVNIFSP 428
FCV + + Y+ S+ H+ +W+ +++++ +F ++C +S ++ +FSP
Sbjct: 72 FCVIVGIRMYLDSNNKRKALHRF-MWSTYFLVLIAIFKYLLCLKLSSKTGLEYSEVFSP 129
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,901,752
Number of Sequences: 53049
Number of extensions: 303033
Number of successful extensions: 795
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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