Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5c01
         (370 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   3.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   3.5  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   3.5  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   8.1  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 344 CTILHKLIVDDFHACWLTIPSSLWNSFLEV 255
           CT + K  +D     + T     WN F+E+
Sbjct: 78  CTEIQKQNLDKLAEWFTTNEPEKWNHFVEI 107


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 17/72 (23%), Positives = 29/72 (40%)
 Frame = +3

Query: 9   GYFTLLSGCGIQENFNLFLRIKVNKNINKMSAWRQAGLTYINYSNIAAKVLRRSLKQEFR 188
           G  TLLS   I E   +  + ++      +  W+   L Y  +  I+  +    + +EF 
Sbjct: 233 GMKTLLSETDIWEVEQILAKKEIKGVPTYLIKWKNWDLKYNTWEPISNLINCSDILEEFE 292

Query: 189 AEALKRDESHVR 224
              L+  ES  R
Sbjct: 293 RNRLQLLESFKR 304


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 344 CTILHKLIVDDFHACWLTIPSSLWNSFLEV 255
           CT + K  +D     + T     WN F+E+
Sbjct: 78  CTEIQKQNLDKLAEWFTTNEPEKWNHFVEI 107


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 15  FTLLSGCGIQENFNLFLRIKVNKNINKMSAWRQAGLTY 128
           FT+ +G G+ E+  + L+ +VN  +  +      GLTY
Sbjct: 42  FTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLTY 79


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 69  IKVNKNINKMSAWRQAGLTY 128
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 69  IKVNKNINKMSAWRQAGLTY 128
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 69  IKVNKNINKMSAWRQAGLTY 128
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 290 IPSSLWNSFLEVCRS 246
           I  SL   FL+VCRS
Sbjct: 334 IRESLDTQFLQVCRS 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,932
Number of Sequences: 438
Number of extensions: 1696
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)