Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5b11
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    27   0.56 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   7.0  
AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative odorant-b...    23   9.2  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.2  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 599 LLEHCRCYLNFDNGGAFCLICSQ 667
           +LE CR Y+N     AFCL  SQ
Sbjct: 898 VLEICRIYVNLCECDAFCLAVSQ 920


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 686 RRQRPASVNKSDRRRLHCQSLDSTCNAP 603
           RR+RP    + DRRR    +     NAP
Sbjct: 334 RRRRPPPRRRHDRRRYPTNAGHKVMNAP 361


>AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative
           odorant-binding protein OBPjj12 protein.
          Length = 119

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 108 LLTTSLLVDNIRIGIKPRAFEK*R 179
           LL   LLV + R+ +KP  FE  R
Sbjct: 9   LLAIVLLVHSCRMSLKPSVFESLR 32


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3

Query: 519 VPWNSVMQIGGCV*QCWSADGRRDEQDYWSIAGAI 623
           VP     QIGG V     A  RR E+DY     A+
Sbjct: 94  VPGIVAAQIGGIVFISCYARPRRPEEDYEGFLAAV 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,197
Number of Sequences: 2352
Number of extensions: 14882
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)