Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5b10
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.3  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.7  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +1

Query: 88  ILAADLSPPQLSVKPSAPPAEPLTQHVSECKVCFDR 195
           +L+   + P  S     PP  PL+     C +C DR
Sbjct: 57  LLSPSGNTPNKSSTSPYPPNHPLSGSKHLCSICGDR 92


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 371 IIINSLFLKNVVVICNV 321
           I +++L+  NVV IC+V
Sbjct: 912 IFVSTLYTANVVCICHV 928


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 215 CLAVTWLCARNVRVGASAVVCATQKLCSASK 307
           C+A +  C +N    A   +C +Q  C A K
Sbjct: 90  CIAGSAPCRKNTGRCAFDGICCSQDSCHADK 120


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 398 LIIFLSYNAIIINSLFLKNVVVICNVY*GNVSMR 297
           LII L    II  +L      ++ N +  N+S+R
Sbjct: 250 LIILLILYCIIAKNLMSNAATLVLNKHIDNISLR 283


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 55  HFSKLDVAEKEILAADLSPPQLSVKPS 135
           +F KLD  E ++   D  PP  S + S
Sbjct: 137 NFMKLDEIEVKVTGNDAPPPITSFETS 163


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 181 VCFDREKSVCFMPCRH 228
           +C   EKSV    CRH
Sbjct: 135 ICVQTEKSVFDFLCRH 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,347
Number of Sequences: 336
Number of extensions: 2642
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)