Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5b10
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0088 + 14494711-14494931,14496309-14496399,14496496-144965... 53 2e-07
11_06_0007 - 19171122-19172036 49 3e-06
02_01_0238 - 1576211-1576759,1577315-1577664,1578684-1578816 44 7e-05
04_03_0815 - 19949584-19950111,19950210-19950632 44 9e-05
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 44 1e-04
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 43 2e-04
05_01_0299 - 2322204-2322734,2324089-2326164 43 2e-04
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 42 3e-04
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 42 4e-04
04_03_0817 + 20003128-20003189,20003270-20003693,20003788-20004345 42 5e-04
11_06_0010 + 19235419-19236450 41 6e-04
05_04_0224 - 19198722-19198835,19198947-19199436,19200478-192006... 41 8e-04
02_04_0043 + 19185969-19186036,19186205-19187342 40 0.001
01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320 40 0.002
06_01_1014 - 7936514-7936530,7936768-7936859,7937290-7937581,793... 38 0.004
09_04_0651 - 19224403-19225032 38 0.008
08_02_1334 - 26224546-26225337 37 0.010
03_05_0617 + 26163161-26163595,26163678-26164202 37 0.014
07_03_1380 - 26163993-26164076,26164769-26165365 35 0.042
01_05_0397 + 21753095-21753814 35 0.042
01_05_0393 - 21732178-21732287,21732875-21733436 35 0.042
03_05_1059 - 30020877-30021539,30022367-30022375 35 0.055
07_03_0207 - 15183894-15184685,15184993-15185078,15186042-151861... 34 0.097
04_04_0717 - 27525117-27525248,27525384-27525549,27525629-275258... 34 0.097
01_06_1809 - 40029628-40030539 33 0.13
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702... 33 0.17
03_01_0542 + 4071906-4072241,4073093-4073184,4073275-4073317,407... 33 0.17
01_05_0394 + 21733751-21734584 33 0.17
07_03_1381 - 26166673-26166747,26166972-26167544 33 0.22
02_05_0350 - 28179063-28179584,28179674-28180041,28180179-281802... 33 0.22
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631... 32 0.30
01_05_0395 + 21739350-21740165 32 0.30
01_05_0398 - 21756818-21757534 32 0.39
07_03_1345 + 25919379-25920866,25921342-25921962,25922733-259228... 31 0.52
01_07_0311 + 42667114-42667132,42667336-42667367,42667449-426678... 31 0.90
10_08_0490 + 18279370-18279732,18280776-18280834,18281642-18282728 29 2.7
07_03_1121 - 24130451-24130462,24130827-24131255 29 2.7
08_01_0413 - 3679887-3681254 29 3.6
07_03_1513 - 27327702-27328604,27329957-27329995,27330413-273306... 28 4.8
07_03_1382 - 26170563-26170631,26171151-26171843 28 4.8
06_02_0166 + 12522172-12522890,12523567-12524596 28 4.8
01_05_0392 + 21729501-21729895,21730198-21730312 28 4.8
08_01_0957 - 9501132-9502106 28 6.3
07_03_1405 + 26340645-26340921,26341003-26341226,26341315-263415... 27 8.4
07_03_1289 + 25531531-25531995 27 8.4
01_01_0028 + 209283-209563,209659-209890,210015-210160,210694-21... 27 8.4
>09_04_0088 +
14494711-14494931,14496309-14496399,14496496-14496571,
14496671-14496755,14497381-14497450,14499111-14499316,
14499434-14499508,14501043-14501133,14501400-14501441,
14501661-14501741,14502010-14502089,14502254-14502365
Length = 409
Score = 52.8 bits (121), Expect = 2e-07
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNAKIMQRI 303
C++CF+R+ + +PCRH +C CS +C+ C +C I ++
Sbjct: 351 CRICFERDICIVLLPCRHYVLCEACSDKCRSCPICRVSIENKL 393
>11_06_0007 - 19171122-19172036
Length = 304
Score = 48.8 bits (111), Expect = 3e-06
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNA 285
CK C +RE +V +PCRHL +C C R + C VC A
Sbjct: 254 CKACGEREAAVLLLPCRHLCLCRACEARAEACPVCLA 290
>02_01_0238 - 1576211-1576759,1577315-1577664,1578684-1578816
Length = 343
Score = 44.4 bits (100), Expect = 7e-05
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVC 279
C++C +E +V MPCRHL +C +C + C VC
Sbjct: 296 CRLCRMKEAAVLVMPCRHLCLCADCEKNADVCPVC 330
>04_03_0815 - 19949584-19950111,19950210-19950632
Length = 316
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 136 APPAEPLTQHVSECKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNA 285
A A+ + CK C E SV +PCRHL +C C C VC A
Sbjct: 256 AAAADVAVSTATSCKACRVAEASVLLLPCRHLCLCGACEAAADACPVCAA 305
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 TQHVSECKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVC-NAKIM 294
++ ++ C+VC E + +PCRHL +C EC + C +C ++KI+
Sbjct: 290 SKDLTACRVCKSSEACMLLLPCRHLCLCKECESKLSFCPLCQSSKIL 336
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +1
Query: 109 PPQLSVKPSAPPAEPLTQHVSECKVCFDREKSVCFMPCRHLAVCTECSRR-----CKRCC 273
P S K S P + T +C +C E V + C H +C C++R RC
Sbjct: 635 PSPASNKQSQAPTQK-TSRRRDCVICKREEACVILLQCAHQVLCVGCNKRHEEKGVARCP 693
Query: 274 VCNAKIMQRI 303
CNAK+ +RI
Sbjct: 694 CCNAKVEERI 703
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +1
Query: 160 QHVSECKVCFDREKSVCFMPCRHLAVCTECS-----RRCKRCCVCNAKIMQRI 303
Q EC +C E SV F+PC H VC +C+ + K C C I +R+
Sbjct: 809 QRDRECVMCLSEEMSVVFLPCAHQVVCAKCNDLHDKQGMKECPSCRTPIQRRV 861
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 42.3 bits (95), Expect = 3e-04
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 172 ECKVCFDREKSVCFMPCRHLAVCTECSR----RCKRCCVCNAKIMQRIE 306
EC +C + +PCRH+ +C+EC++ + RC +C + + +E
Sbjct: 343 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTNRCPICRQPVERLLE 391
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 41.9 bits (94), Expect = 4e-04
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 172 ECKVCFDREKSVCFMPCRHLAVCTECSR----RCKRCCVCNAKIMQRIE 306
EC +C + +PCRH+ +C+EC++ + RC +C + + +E
Sbjct: 338 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTTRCPICRQPVERLLE 386
>04_03_0817 + 20003128-20003189,20003270-20003693,20003788-20004345
Length = 347
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 136 APPAEPLTQHVSECKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNA 285
A A T + CK C E S+ +PCRHL +C C C VC A
Sbjct: 287 ADDAASKTPAAALCKACGAGEASMLLLPCRHLCLCRGCEAAVDACPVCAA 336
>11_06_0010 + 19235419-19236450
Length = 343
Score = 41.1 bits (92), Expect = 6e-04
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNA 285
CK C + + +V +PCRHL +C C + C VC A
Sbjct: 296 CKSCGEGDATVLLLPCRHLCLCKACEPKLDACPVCLA 332
>05_04_0224 -
19198722-19198835,19198947-19199436,19200478-19200641,
19202534-19202632,19204069-19204175,19204278-19204401,
19205113-19205242,19205314-19205433,19205861-19206002,
19207243-19207326,19207651-19207742,19207855-19207944,
19208057-19208136,19208312-19208451,19208587-19209067
Length = 818
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 172 ECKVCFDREKSVCFMPCRHLAVCTECSRRCK----RCCVCNAKIMQRIE 306
EC +C + PCRHL +C+EC++ + +C +C + + +E
Sbjct: 762 ECVICLTEPRDTAVFPCRHLCMCSECAKTLRFQTDKCPICRQPVEKLME 810
>02_04_0043 + 19185969-19186036,19186205-19187342
Length = 401
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNA 285
C+ C + + V +PCRHL +C C C VC A
Sbjct: 354 CRACGEADACVLLLPCRHLCLCRGCEAAADACPVCAA 390
>01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320
Length = 313
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query: 172 ECKVCFDREKSVCFMPCRHLAVCTECSRRCK----RCCVCNAKI 291
EC VC + +PCRH+ +C EC++ K +C +C +
Sbjct: 245 ECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPV 288
>06_01_1014 -
7936514-7936530,7936768-7936859,7937290-7937581,
7937690-7937759,7938131-7938223
Length = 187
Score = 38.3 bits (85), Expect = 0.004
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRR 258
CK+C+D +S F+PC H C C+RR
Sbjct: 125 CKICYDAPRSCFFIPCGHGFACFTCARR 152
>09_04_0651 - 19224403-19225032
Length = 209
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCK----RCCVCNAKI 291
C VC R K+ F+PC H C C+R + RC +CNA I
Sbjct: 161 CCVCMARGKAAAFIPCGH-TFCRACARELRVGRGRCPLCNAAI 202
>08_02_1334 - 26224546-26225337
Length = 263
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRC----KRCCVCNAKIMQRIE 306
C VC R K F+PC H C C+R RC +CNA I+ ++
Sbjct: 215 CCVCMARAKGAAFIPCGH-TFCRTCARELLAGRGRCPLCNAAILDVLD 261
>03_05_0617 + 26163161-26163595,26163678-26164202
Length = 319
Score = 36.7 bits (81), Expect = 0.014
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVC 279
CK C + V +PCRHL C C+ C C
Sbjct: 272 CKGCGEAAAVVLLLPCRHLCACAPCAAAAAACPAC 306
>07_03_1380 - 26163993-26164076,26164769-26165365
Length = 226
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = +1
Query: 169 SECKVCFDREKSVCFMPCRHLAVCTECSRRC------KRCCVCNA 285
S C VC + + PC H VC CS R +RCC+C A
Sbjct: 35 SSCAVCTEPLEWAAIGPCGHGDVCAGCSLRIRVFQNNRRCCICRA 79
>01_05_0397 + 21753095-21753814
Length = 239
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Frame = +1
Query: 166 VSECKVCFDREKSVCFMPCRHLAVCTECSRRCK-------RCCVC 279
V C VC + + V PC H VC+ C+ R + RCCVC
Sbjct: 36 VPSCVVCTEPIEWVAVGPCGHRVVCSPCAARLRSGPNPDHRCCVC 80
>01_05_0393 - 21732178-21732287,21732875-21733436
Length = 223
Score = 35.1 bits (77), Expect = 0.042
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Frame = +1
Query: 166 VSECKVCFDREKSVCFMPCRHLAVCTECSRRCK-------RCCVC 279
V C VC + + PC H AVC+ C+ R + RCC+C
Sbjct: 66 VPSCAVCTEPLEWAAVGPCGHRAVCSACAARVRSAPNPDNRCCIC 110
>03_05_1059 - 30020877-30021539,30022367-30022375
Length = 223
Score = 34.7 bits (76), Expect = 0.055
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 220 CRHLAVCTECSRRCKRCCVCNAKI 291
C H ++C ECS+RC C +C + I
Sbjct: 46 CGHASLCAECSQRCDVCPICRSPI 69
>07_03_0207 -
15183894-15184685,15184993-15185078,15186042-15186144,
15186890-15186971,15187112-15187203,15187295-15187383,
15187467-15187547,15188610-15188724,15188894-15188935
Length = 493
Score = 33.9 bits (74), Expect = 0.097
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCKR----CCVCNAKIMQRI 303
C +C D +PC H+A C C + + C +C AKI Q I
Sbjct: 442 CVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQII 488
>04_04_0717 - 27525117-27525248,27525384-27525549,27525629-27525831,
27525911-27526048,27526642-27526725,27526864-27526950,
27527048-27527120,27527169-27527432,27527692-27527768,
27527886-27527957,27528049-27528209,27528238-27528484,
27528588-27528707,27528846-27528929,27529205-27529341,
27529689-27529856,27530093-27530317,27530865-27530952,
27531033-27531194,27532797-27532919
Length = 936
Score = 33.9 bits (74), Expect = 0.097
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Frame = +1
Query: 52 EHFSKLDVAEK-EILAADLSPPQLSVKPSAPPAEPLTQHVSE------CKVCFDREKSVC 210
E FSK + + E+++ S + + SA E L V E C +C DR+K V
Sbjct: 837 ERFSKKRIEDDLEVMSRKASSLRAKARESAV-LEKLRHEVKEYRGILKCGICHDRQKEVV 895
Query: 211 FMPCRHLAVCTEC-----SRRCKRCCVCN 282
C HL C +C R +RC C+
Sbjct: 896 ITKCYHL-FCNQCIQKSLGNRQRRCPSCS 923
>01_06_1809 - 40029628-40030539
Length = 303
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +1
Query: 166 VSECKVCFDREKSVCFMPCRHLAVCTECSRRC----KRCCVCNAKIMQRIE 306
V C VC R K F+PC H C CSR C +CN I + ++
Sbjct: 252 VHVCCVCMVRHKGAAFIPCGH-TFCRLCSRELWVSRGNCPLCNGFIQEILD 301
>10_08_0961 +
21869612-21869773,21869869-21869956,21870047-21870277,
21870371-21870538,21870808-21871001,21871151-21871234,
21871315-21871434,21871621-21871714,21871813-21871973,
21873237-21873313,21873738-21873932,21874487-21874559,
21874635-21874721,21874906-21875043,21875181-21875383,
21875469-21875631,21875861-21875992
Length = 789
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 166 VSECKVCFDREKSVCFMPCRHLAVCTECSRR 258
+ +C VCFDR K V C HL C+ C +R
Sbjct: 734 ILKCGVCFDRPKEVVITKCFHL-FCSPCIQR 763
>03_01_0542 +
4071906-4072241,4073093-4073184,4073275-4073317,
4073601-4073720,4073785-4073949,4074042-4074163,
4074357-4074476,4074645-4074936
Length = 429
Score = 33.1 bits (72), Expect = 0.17
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECS 252
C +C + + F+PC HL C +C+
Sbjct: 377 CVICLRKRRKAAFIPCGHLVCCCKCA 402
>01_05_0394 + 21733751-21734584
Length = 277
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRCK-------RCCVC 279
C VC + + V PC H VC+ C+ R + RCC C
Sbjct: 75 CVVCMEPLEWVAVGPCGHRVVCSACAARVRSAPYSDHRCCTC 116
>07_03_1381 - 26166673-26166747,26166972-26167544
Length = 215
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = +1
Query: 169 SECKVCFDREKSVCFMPCRHLAVCTECS------RRCKRCCVCNA 285
S C VC + + PC H VC C+ + +RCC+C A
Sbjct: 30 SSCVVCMEPLEWAAIGPCGHGDVCAGCALHIRVFQNNRRCCICRA 74
>02_05_0350 -
28179063-28179584,28179674-28180041,28180179-28180270,
28180366-28180412
Length = 342
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTEC 249
C C R +V +PCRHL++C +C
Sbjct: 290 CLTCRLRPATVVLLPCRHLSLCGDC 314
>05_03_0281 +
11560402-11560569,11561373-11561579,11562966-11563174,
11563261-11563309,11563611-11563673,11563799-11565472
Length = 789
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRC------KRCCVCNAK 288
C VC D + V + C H VC+ C R K CC+C +
Sbjct: 5 CAVCADALEWVAYGACGHREVCSTCVVRLRFVMGDKHCCICKTE 48
>01_05_0395 + 21739350-21740165
Length = 271
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Frame = +1
Query: 166 VSECKVCFDREKSVCFMPCRHLAVCTECSRRCKR-------CCVC 279
+ C VC + + V PC H VC C+ R + CC+C
Sbjct: 74 IPSCAVCMEPLEWVAVGPCGHRVVCPACAARVRSAPKPDHLCCIC 118
>01_05_0398 - 21756818-21757534
Length = 238
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Frame = +1
Query: 166 VSECKVCFDREKSVCFMPCRHLAVCTECSRRC-------KRCCVCNAK 288
+ C VC + + V PC H AVC+ C R KR C+C +
Sbjct: 64 ILSCVVCTEPLEWVAVGPCGHRAVCSMCVARVRAGPDADKRSCICRTR 111
>07_03_1345 + 25919379-25920866,25921342-25921962,25922733-25922893,
25923284-25923422,25923509-25923592,25923944-25923982,
25924037-25924222,25924347-25924478,25924810-25925009,
25925294-25925498,25925618-25925944
Length = 1193
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRR----CKRCCVCNAKI 291
C +C++ + F PC H + C C R +RC CNA +
Sbjct: 1133 CCICYNSDSDTTFEPCHHRS-CYGCITRHLLNSQRCFFCNAVV 1174
>01_07_0311 +
42667114-42667132,42667336-42667367,42667449-42667822,
42667895-42668028,42668147-42668303,42668994-42669098,
42669342-42669645,42670404-42670478,42671467-42672589,
42673686-42673727,42674017-42674111,42674199-42674239,
42674375-42674414
Length = 846
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 91 LAADLSPPQLSVKPSAPPAEPLTQHVSECKVC--FDREKSVCFMPCRHLAVC 240
LA + P +L++K P AE L C VC FD CF+ C+ + +C
Sbjct: 569 LAHNSLPLKLNIKRRVPDAETL------CPVCKRFDENGGHCFLQCKPMKLC 614
>10_08_0490 + 18279370-18279732,18280776-18280834,18281642-18282728
Length = 502
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 151 PLTQHVSECKVC-FDREKSVCFMPCRHLAVCTECSRRCKRCCVCNAKIMQRIE 306
PL + V C C F +PC H A C C+R C +C+ +I Q+I+
Sbjct: 100 PLGERVHICCRCEFPIALYGRLIPCEH-AFCLACARSDSSCYLCDERI-QKIQ 150
>07_03_1121 - 24130451-24130462,24130827-24131255
Length = 146
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECSRRC------KRCCVCNA 285
C VC + + V PC H VC C + +RC VC A
Sbjct: 31 CAVCVEPLEWVAIGPCGHRCVCARCIVQVRFVSEDRRCHVCRA 73
>08_01_0413 - 3679887-3681254
Length = 455
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ECKVCFDREKSVCFMPCRHLAVCTEC 249
EC +CF+ K PC HL C C
Sbjct: 240 ECNICFESAKDPVVTPCGHL-FCWPC 264
>07_03_1513 - 27327702-27328604,27329957-27329995,27330413-27330692,
27330772-27330942,27331025-27331857,27331939-27332400,
27332479-27333212,27333301-27333430
Length = 1183
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 91 LAADLSPPQLSVKPSAPPAEPLTQHVSECKVC--FDREKSVCFMPCRHLAVC 240
LA + P ++++K P A+ L C VC FD CF+ C+ + +C
Sbjct: 1030 LAHNSLPLKINIKRRVPDAKTL------CPVCKRFDENGGHCFLKCKPMKLC 1075
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Frame = +1
Query: 175 CKVCFDREKSVCFMPCRHLAVCTECS------RRCKRCCVCNA 285
C VC + + PC H VC C+ + + CC+C +
Sbjct: 68 CAVCMETLEWAAIGPCGHGEVCAGCALHIRVFQNNRLCCICRS 110
>06_02_0166 + 12522172-12522890,12523567-12524596
Length = 582
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 73 VAEKEILAADLSPPQLSVKPSAPPA 147
VAE+E+ AA LSPP ++ P P+
Sbjct: 268 VAEEEVAAAALSPPPVTTPPPPRPS 292
>01_05_0392 + 21729501-21729895,21730198-21730312
Length = 169
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 9/32 (28%)
Frame = +1
Query: 217 PCRHLAVCTECSRRCK---------RCCVCNA 285
PC H VC+ C+ R + RCC+C A
Sbjct: 11 PCGHAGVCSVCAARIRSSRSWQPDLRCCICRA 42
>08_01_0957 - 9501132-9502106
Length = 324
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 425 LLQVLLCSRLIIFLSYNAIIINSLFLKNVVVICNV 321
++ +L S L++FL A+++ SLFL + V+C V
Sbjct: 170 VVPLLEYSLLLLFLDAMAVLLASLFLVYLTVVCAV 204
>07_03_1405 +
26340645-26340921,26341003-26341226,26341315-26341562,
26341622-26342051,26342630-26343049
Length = 532
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 106 SPPQLSVKPSAPPAEPLTQHVSECKVCF 189
+PP+L K PP + + + ECK F
Sbjct: 307 APPELGTKRRQPPVLSMDEIIDECKTFF 334
>07_03_1289 + 25531531-25531995
Length = 154
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 67 LDVAEKEILAADLSPPQLSVKPSAPPAEPLTQHVSECK 180
+D+ EK++ + L P + +P+A A P VS C+
Sbjct: 89 MDLTEKDLDLSKLQPTPAAARPTATGAPPAMVVVSACQ 126
>01_01_0028 +
209283-209563,209659-209890,210015-210160,210694-210724,
211433-211579,212490-212639,212741-212788
Length = 344
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 175 CKVCFD--REKSVCFMPCRHLAVCTECSRRCKRCCVCNAKIMQRIE 306
C VC + S C PC H C C R K C +C A I Q IE
Sbjct: 72 CMVCHALLHQSSKC-TPCSH-KFCKACILRFKDCPLCGADI-QGIE 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,403,616
Number of Sequences: 37544
Number of extensions: 251775
Number of successful extensions: 954
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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