Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5b06
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.15 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    27   0.15 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -2

Query: 433 DTTYMMTNFFCTII*KRQFFDLFHCNDVFTISKSF*ETSNNYKR-SI*IGCVFIYLY*NK 257
           D  Y+ T + CT++ K +  +LF     F        T  +YKR    + C  +  Y   
Sbjct: 85  DFAYLETTWICTLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRLLCYLLARYVAL 144

Query: 256 ILVIFHSNIYIISS 215
            LVI  S I +I S
Sbjct: 145 ALVILFSEILVIVS 158


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -2

Query: 433 DTTYMMTNFFCTII*KRQFFDLFHCNDVFTISKSF*ETSNNYKR-SI*IGCVFIYLY*NK 257
           D  Y+ T + CT++ K +  +LF     F        T  +YKR    + C  +  Y   
Sbjct: 103 DFAYLETTWICTLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRLLCYLLARYVAL 162

Query: 256 ILVIFHSNIYIISS 215
            LVI  S I +I S
Sbjct: 163 ALVILFSEILVIVS 176


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 577 SFTSQYTCHFSVVITFRHFFFF 642
           S  + + C  S +  F H FFF
Sbjct: 56  SSVTLHVCFNSYMYAFTHIFFF 77


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 501 LVKYH*VKMVMLNSRLNNI 557
           LVK   ++ V+LN ++NN+
Sbjct: 460 LVKMLKIRFVILNKQINNL 478


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 501 LVKYH*VKMVMLNSRLNNI 557
           LVK   ++ V+LN ++NN+
Sbjct: 185 LVKMLKIRFVILNKQINNL 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,802
Number of Sequences: 336
Number of extensions: 2733
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)