Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5a21
         (105 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p pro...    38   0.001
AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p pro...    38   0.001
AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC...    38   0.001
AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB...    38   0.001
AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA...    38   0.001
AE014134-668|AAF51067.1| 1131|Drosophila melanogaster CG10019-PA...    27   4.6  

>BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p
           protein.
          Length = 307

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +1

Query: 1   GCTVEGRPPHDLIDDINSGALTI 69
           GCTV+G+ PHD+ID++N G++ +
Sbjct: 282 GCTVDGKHPHDVIDELNEGSIEV 304


>AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p
           protein.
          Length = 165

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +1

Query: 1   GCTVEGRPPHDLIDDINSGALTI 69
           GCTV+G+ PHD+ID++N G++ +
Sbjct: 140 GCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC,
           isoform C protein.
          Length = 165

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +1

Query: 1   GCTVEGRPPHDLIDDINSGALTI 69
           GCTV+G+ PHD+ID++N G++ +
Sbjct: 140 GCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB,
           isoform B protein.
          Length = 165

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +1

Query: 1   GCTVEGRPPHDLIDDINSGALTI 69
           GCTV+G+ PHD+ID++N G++ +
Sbjct: 140 GCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA,
           isoform A protein.
          Length = 165

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +1

Query: 1   GCTVEGRPPHDLIDDINSGALTI 69
           GCTV+G+ PHD+ID++N G++ +
Sbjct: 140 GCTVDGKHPHDVIDELNEGSIEV 162


>AE014134-668|AAF51067.1| 1131|Drosophila melanogaster CG10019-PA
           protein.
          Length = 1131

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 104 FFFIDIRNIYSSMVKAPLLMSSIRSCG 24
           +FF+DI ++ S  VK  L+ SS+ S G
Sbjct: 631 YFFLDISSLKSVTVKILLMTSSVASFG 657


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,682,083
Number of Sequences: 53049
Number of extensions: 39347
Number of successful extensions: 106
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 24,988,368
effective HSP length: 16
effective length of database: 24,139,584
effective search space used: 434512512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)