Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5a16
(427 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P21288 Cluster: Late expression factor 11; n=6; Nucleop... 116 2e-25
UniRef50_P11042 Cluster: Early 39 kDa protein; n=5; Nucleopolyhe... 99 3e-20
UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5; Nucleop... 62 4e-09
UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1; Chorist... 62 6e-09
UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39... 54 1e-06
UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7; Nucleopolyhe... 51 1e-05
UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata nucleop... 50 2e-05
UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai NPV... 50 3e-05
UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3; Nucleopolyhedro... 48 6e-05
UniRef50_Q4KT52 Cluster: 39K/pp31; n=2; Nucleopolyhedrovirus|Rep... 48 1e-04
UniRef50_Q91BX9 Cluster: 39K Protein; n=4; Nucleopolyhedrovirus|... 46 3e-04
UniRef50_Q8QL84 Cluster: 39k/pp31; n=2; Nucleopolyhedrovirus|Rep... 44 0.001
UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear pol... 44 0.001
UniRef50_Q9YMT0 Cluster: Ld-39K/pp31; n=1; Lymantria dispar MNPV... 40 0.016
UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura NPV... 38 0.087
UniRef50_A2DYN8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.11
UniRef50_Q5CPV7 Cluster: 26S proteasome regulatory complex, subu... 36 0.26
UniRef50_UPI000150A96F Cluster: hypothetical protein TTHERM_0047... 34 1.4
UniRef50_Q4MZV6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.9
UniRef50_A0SQK5 Cluster: Calmodulin-binding transcription activa... 33 1.9
UniRef50_O63897 Cluster: RNA-dependent RNA polymerase; n=1; Bryo... 33 2.5
UniRef50_Q22BU5 Cluster: Putative uncharacterized protein; n=1; ... 33 2.5
UniRef50_Q170N7 Cluster: Putative uncharacterized protein; n=2; ... 33 3.3
UniRef50_Q7R9D4 Cluster: Serine/threonine-protein kinase, putati... 32 4.3
UniRef50_A2EWM0 Cluster: Putative uncharacterized protein; n=2; ... 32 4.3
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 32 4.3
UniRef50_Q73HD3 Cluster: Prophage LambdaW5, ankyrin repeat domai... 32 5.7
UniRef50_Q8IHV4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.7
UniRef50_UPI00006CE556 Cluster: hypothetical protein TTHERM_0014... 31 7.5
UniRef50_Q98PM9 Cluster: MEMBRANE NUCLEASE, LIPOPROTEIN; n=3; ro... 31 7.5
UniRef50_Q6MAW0 Cluster: Putative uncharacterized protein; n=33;... 31 7.5
UniRef50_A3YCB4 Cluster: General secretion pathway protein M; n=... 31 7.5
UniRef50_Q7REP6 Cluster: Maf-like protein, putative; n=3; Plasmo... 31 7.5
UniRef50_Q24I61 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_Q23RM7 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_Q23QB0 Cluster: Putative uncharacterized protein; n=1; ... 28 8.1
UniRef50_Q8RHJ6 Cluster: ABC1 family protein; n=2; Fusobacterium... 31 9.9
UniRef50_Q57S11 Cluster: Putative uncharacterized protein; n=1; ... 31 9.9
UniRef50_A4W1F6 Cluster: Putative uncharacterized protein; n=2; ... 31 9.9
UniRef50_Q8IKD8 Cluster: Putative uncharacterized protein; n=1; ... 31 9.9
UniRef50_Q8I5B0 Cluster: Putative uncharacterized protein; n=2; ... 31 9.9
UniRef50_Q54XR3 Cluster: Inositol phosphate kinase; n=2; Dictyos... 31 9.9
UniRef50_O14802 Cluster: DNA-directed RNA polymerase III subunit... 31 9.9
>UniRef50_P21288 Cluster: Late expression factor 11; n=6;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 112
Score = 116 bits (280), Expect = 2e-25
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +3
Query: 3 RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 161
RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYK QTW
Sbjct: 60 RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKKQTW 112
>UniRef50_P11042 Cluster: Early 39 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 275
Score = 99.1 bits (236), Expect = 3e-20
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +2
Query: 158 MVNMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILN 325
MVN+PEQQS ETAAVC NEKLLNKLESSSYNKSNMDQL IVNFLE+KNINYILN
Sbjct: 1 MVNVPEQQSP-ETAAVCKNEKLLNKLESSSYNKSNMDQLAVIVNFLERKNINYILN 55
Score = 72.5 bits (170), Expect = 3e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3
Query: 297 KKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
+++ + ++PVMQDERKMSKRKKKVINNNKYILFNSWYTK
Sbjct: 46 ERKNINYILNVVPVMQDERKMSKRKKKVINNNKYILFNSWYTK 88
>UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Length = 126
Score = 62.5 bits (145), Expect = 4e-09
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +3
Query: 3 RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 161
RANL FTVIT KCSKRKVC H KRIAR L ++K EY V+ VY W
Sbjct: 74 RANLSRFTVITGKCSKRKVCHHDKRIARTLHLEKNLVDEYACSVTHVYSAPKW 126
>UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1;
Choristoneura fumiferana MNPV|Rep: Late expression
factor 11 - Choristoneura fumiferana nuclear
polyhedrosis virus (CfMNPV)
Length = 107
Score = 61.7 bits (143), Expect = 6e-09
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +3
Query: 3 RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 161
RANL FTVIT KCSKRKVC HH+RI R L + EY V+ VY++ W
Sbjct: 55 RANLSRFTVITGKCSKRKVCNHHRRIKRTLELNLNLVNEYACSVTDVYRSPKW 107
>UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39K -
Ecotropis obliqua NPV
Length = 293
Score = 54.0 bits (124), Expect = 1e-06
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +3
Query: 294 WKKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
++K+ +T + T+ + +RK+ KR KK+I NNKYILFNSWYTK
Sbjct: 35 FEKKKMTYNITVNEIHNYDRKIVKRGKKMITNNKYILFNSWYTK 78
Score = 34.3 bits (75), Expect = 1.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 224 LNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACH 340
L+K E+S YNKS+ + +A + EKK + Y + N H
Sbjct: 12 LSKYENSVYNKSDNEINVAKIKLFEKKKMTYNITVNEIH 50
>UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 261
Score = 50.8 bits (116), Expect = 1e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +2
Query: 158 MVNMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANAC 337
MVN+P+ E + N L+++LE+S++NKSN + L +NF EKK++NY + A C
Sbjct: 1 MVNLPDNVH--EESFANNNASLISRLENSAFNKSNFEYLKTCINFFEKKSVNYTVVALPC 58
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3
Query: 294 WKKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
++K+++ + +P DERK SKR K+V N+N YILFNS+YTK
Sbjct: 44 FEKKSVNYTVVALPCSGDERKASKRPKRVNNHNMYILFNSFYTK 87
>UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: 39K/PP31 - Clanis
bilineata nucleopolyhedrosis virus
Length = 281
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 294 WKKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
++K+ + + V ++K K+ KK+INNNKYILFNSWYTK
Sbjct: 35 FEKKKVAYRFKVSEVFNMDKKSVKKVKKIINNNKYILFNSWYTK 78
>UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai
NPV|Rep: 39K protein - Adoxophyes honmai
nucleopolyhedrovirus
Length = 261
Score = 49.6 bits (113), Expect = 3e-05
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 294 WKKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
++K+ + P+ D++K +KR KK I+NNKYILFNSWY K
Sbjct: 33 YEKKKVPYVLLTSPLYTDDKKSAKRAKKPISNNKYILFNSWYHK 76
Score = 33.9 bits (74), Expect = 1.4
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 212 NEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYIL 322
NE LL K E+S +NK+ D L+ +N EKK + Y+L
Sbjct: 7 NEILL-KYENSGHNKTRNDILMQSINMYEKKKVPYVL 42
>UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3;
Nucleopolyhedrovirus|Rep: ORF120 39K / pp31 - Spodoptera
exigua MNPV
Length = 317
Score = 48.4 bits (110), Expect = 6e-05
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 324 TLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
T V+ ++K +KR KK I+NNKYILFNSWYTK
Sbjct: 63 TFAIVIMVDKKNAKRNKKSISNNKYILFNSWYTK 96
>UniRef50_Q4KT52 Cluster: 39K/pp31; n=2; Nucleopolyhedrovirus|Rep:
39K/pp31 - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 317
Score = 47.6 bits (108), Expect = 1e-04
Identities = 18/34 (52%), Positives = 28/34 (82%)
Frame = +3
Query: 324 TLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
T+ ++ +++ +K+ KK+I+NNKYILFNSWYTK
Sbjct: 62 TVAIILLHDKRTAKKTKKMISNNKYILFNSWYTK 95
>UniRef50_Q91BX9 Cluster: 39K Protein; n=4;
Nucleopolyhedrovirus|Rep: 39K Protein - Helicoverpa
armigera NPV
Length = 312
Score = 46.0 bits (104), Expect = 3e-04
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +3
Query: 294 WKKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
++K+ + +MP + D++K+SK+ KK+ +NNKYILFN++ +K
Sbjct: 33 FEKQKIGYQVHVMPTIADDKKLSKKIKKITSNNKYILFNTFISK 76
Score = 38.7 bits (86), Expect = 0.050
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 215 EKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINY 316
E L+ KLE+S YNK++++ L+ ++N EK+ I Y
Sbjct: 7 ESLIIKLENSVYNKTHIETLVNVINLFEKQKIGY 40
>UniRef50_Q8QL84 Cluster: 39k/pp31; n=2; Nucleopolyhedrovirus|Rep:
39k/pp31 - Mamestra configurata NPV-A
Length = 287
Score = 44.4 bits (100), Expect = 0.001
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +3
Query: 336 VMQDERKMSKRKKKVINNNKYILFNSWYTK 425
+ +++K +++ KK+I+ NKYILFNSWYTK
Sbjct: 62 IFNNDKKNARKNKKMISYNKYILFNSWYTK 91
>UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: 39K - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 324
Score = 44.4 bits (100), Expect = 0.001
Identities = 17/46 (36%), Positives = 34/46 (73%)
Frame = +3
Query: 288 ISWKKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
I ++K + +++ P+ QD++K +K+ KK+ ++NKYILFN++ +K
Sbjct: 30 IMFEKSKIPYHASINPMPQDDKKTNKKPKKITSSNKYILFNTFVSK 75
>UniRef50_Q9YMT0 Cluster: Ld-39K/pp31; n=1; Lymantria dispar
MNPV|Rep: Ld-39K/pp31 - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 264
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 294 WKKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWY 419
++K+ ++ + V ++K KR KK +NNKYILFNSWY
Sbjct: 38 FEKKKISYRIKVSEVYGPDKKTVKRGKKNNHNNKYILFNSWY 79
>UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura
NPV|Rep: 39k protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 322
Score = 37.9 bits (84), Expect = 0.087
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +3
Query: 315 ISSTLMPVMQDERKMSKRKKKVINNNKYILFNSWYTK 425
I T +P DE+K ++ KK+I++NKYILFN++ +K
Sbjct: 70 IGVTALPC--DEKKTHRKPKKIISSNKYILFNTFVSK 104
>UniRef50_A2DYN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 391
Score = 37.5 bits (83), Expect = 0.11
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 101 KNISSRIQAGRFKGLQK-SNMVNMPEQQSSTETAAVCXNEKLLNKLESS--SYNKSNMDQ 271
+NIS+ R+K L K N+P ++ ET + N KLL K ES+ Y+K+ M++
Sbjct: 255 RNISN--SENRYKVLSKLPKNNNLPNEEIEMETDQLIKNLKLLQKRESNRIKYSKAEMEE 312
Query: 272 LIAIVNFLEKK 304
L ++ EKK
Sbjct: 313 LTELIQKSEKK 323
>UniRef50_Q5CPV7 Cluster: 26S proteasome regulatory complex, subunit
PSMD5; n=2; Cryptosporidium|Rep: 26S proteasome
regulatory complex, subunit PSMD5 - Cryptosporidium
parvum Iowa II
Length = 505
Score = 36.3 bits (80), Expect = 0.26
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 221 LLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHAGRTQNVQTQ 370
L+ KL S+S ++ ++ L + V F E K+IN ILN G Q+++TQ
Sbjct: 341 LMLKLVSNSKSEISLSSLNSWVTFFESKDINQILNQTKTTFGLKQSIETQ 390
>UniRef50_UPI000150A96F Cluster: hypothetical protein
TTHERM_00472000; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00472000 - Tetrahymena
thermophila SB210
Length = 591
Score = 33.9 bits (74), Expect = 1.4
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 146 QKSNMVNMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILN 325
QKS+ +N EQ E V NEK+LN+LE N DQ ++ +N + N
Sbjct: 472 QKSS-INQHEQ----EEEEVSQNEKILNQLEQIEQNTQQSDQQYELLENNSNQNYSISTN 526
Query: 326 ANA-CHAGRTQNVQTQEE 376
A + + Q+++T ++
Sbjct: 527 EQALSESNKNQSIETNQD 544
>UniRef50_Q4MZV6 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1148
Score = 33.5 bits (73), Expect = 1.9
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +2
Query: 101 KNISSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCXNEKLLNKL---ESSSYNKSNMDQ 271
KN+ +F L N + E E N K L E+ S+N+SN++
Sbjct: 195 KNLKFSTNILKFNQLFNQNNLKFNENLKFNENLKFNENSKFSENLKFNENLSFNQSNLNF 254
Query: 272 LIAIVNFLEKKNINYILNAN 331
+ +NF E N N ILN N
Sbjct: 255 NQSNLNFNESLNFNNILNLN 274
>UniRef50_A0SQK5 Cluster: Calmodulin-binding transcription activator;
n=4; Coelomata|Rep: Calmodulin-binding transcription
activator - Drosophila melanogaster (Fruit fly)
Length = 2009
Score = 33.5 bits (73), Expect = 1.9
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 164 NMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANAC 337
N +Q ++T TAA C N K N L S+ +N + L+ ++ + LN N C
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNNQATEAPNRSQLQSQSQSLSLNQNGC 1078
>UniRef50_O63897 Cluster: RNA-dependent RNA polymerase; n=1;
Bryopsis cinicola|Rep: RNA-dependent RNA polymerase -
Bryopsis cinicola
Length = 824
Score = 33.1 bits (72), Expect = 2.5
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 6 ANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYK 125
AN GH+T + KR C+H IA+ L KKI Q YK
Sbjct: 236 ANSGHYTSLLFGSKKRDSCVHSNLIAKEL-FKKITKQPYK 274
>UniRef50_Q22BU5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 290
Score = 33.1 bits (72), Expect = 2.5
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 164 NMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHA 343
N +Q ++ T N ESS+YNK N ++ L+ KN N ++ +
Sbjct: 109 NSEKQDNNQRTIITRSNNYNKQNNESSNYNKLNEGDFPDFIDKLDSKNTN--ISKDQAKN 166
Query: 344 GRTQNVQTQEEGD*QQ 391
+ NVQ ++ D QQ
Sbjct: 167 NQNSNVQQTKQNDNQQ 182
>UniRef50_Q170N7 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Aedes aegypti (Yellowfever mosquito)
Length = 1379
Score = 32.7 bits (71), Expect = 3.3
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 65 SSQTNCQAVGH*KNISSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCXNEKLLNKLESS 244
+ Q +C + K+ S I A SN N PE+++S E +A KL+N+L +
Sbjct: 7 AEQPSCSSSTSQKSSSETITAATTSASGSSNPPN-PERRASIERSAEQVTRKLINQL--T 63
Query: 245 SYNKSNMDQLI 277
S NK ++ Q+I
Sbjct: 64 SMNKHSLKQVI 74
>UniRef50_Q7R9D4 Cluster: Serine/threonine-protein kinase, putative;
n=4; Plasmodium (Vinckeia)|Rep: Serine/threonine-protein
kinase, putative - Plasmodium yoelii yoelii
Length = 781
Score = 32.3 bits (70), Expect = 4.3
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +2
Query: 158 MVNMPEQQSSTETAAVCXNEKLLNKL-ESSSYNKSNMDQLIAIVN----FLEKKNINYIL 322
M N S + VC N K L+K E +SYN +N + N FL++K NY
Sbjct: 663 MSNKYNSLISLPNSPVCPNWKCLHKYNEQASYNNNNNNNNNTFDNVQNKFLQQKKENYTF 722
Query: 323 NANACHAGRTQNVQTQEE 376
N C+ + Q + + +
Sbjct: 723 FKNNCNDEQFQKILQERD 740
>UniRef50_A2EWM0 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Trichomonas vaginalis G3
Length = 466
Score = 32.3 bits (70), Expect = 4.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 215 EKLLNK--LESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHAGRTQN 358
EK+LN+ + + +Y KS + ++IA+ L+K +Y++N HA Q+
Sbjct: 129 EKILNENIISTFTYRKSIISKIIALAKHLKKYPRSYVINIGRLHALNPQH 178
>UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_21,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 493
Score = 32.3 bits (70), Expect = 4.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 212 NEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNI 310
N+ L+N+L S Y K Q++AI L+KKN+
Sbjct: 105 NQDLMNQLTKSGYQKPTPIQMVAIPIILQKKNL 137
>UniRef50_Q73HD3 Cluster: Prophage LambdaW5, ankyrin repeat domain
protein; n=10; Wolbachia|Rep: Prophage LambdaW5, ankyrin
repeat domain protein - Wolbachia pipientis wMel
Length = 966
Score = 31.9 bits (69), Expect = 5.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +2
Query: 212 NEKLLNKLESSSYNKSNMDQLIAIVNFLEK----KNINYILNANACHAGRT 352
N+KLLN + +N N D + FLE K++ Y+LN H G T
Sbjct: 99 NQKLLNSI-IKDFNMGNYDSFSNLKQFLESNEKNKDLKYVLNLKRGHLGTT 148
>UniRef50_Q8IHV4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 2563
Score = 31.9 bits (69), Expect = 5.7
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 146 QKSNMVNMPEQQSSTETAAVCXNEKLLNKLES--SSYNKSNMDQLIAIVNFLEKKNINYI 319
++S + N ++ SS E+ +E ++NK++ S + + I N E++ NY
Sbjct: 1653 KESYLDNSKDKNSSHESYENNISENVINKMDGFYKSLTPHEIKKNIYCSNISEEEKNNYF 1712
Query: 320 LNANACHAGRTQNVQTQE-EGD 382
+ + +T+N TQE +GD
Sbjct: 1713 PSQSILRCDKTKNTSTQEIDGD 1734
>UniRef50_UPI00006CE556 Cluster: hypothetical protein
TTHERM_00143730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00143730 - Tetrahymena
thermophila SB210
Length = 394
Score = 31.5 bits (68), Expect = 7.5
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 227 NKLESSSYNKSNMDQLIAIVNFLEKKNINYILNAN 331
N+ SSS + N+ IV LE+KNI YI+N+N
Sbjct: 315 NRSNSSSQSSQNLFDFETIVQ-LEQKNIEYIINSN 348
>UniRef50_Q98PM9 Cluster: MEMBRANE NUCLEASE, LIPOPROTEIN; n=3;
root|Rep: MEMBRANE NUCLEASE, LIPOPROTEIN - Mycoplasma
pulmonis
Length = 1125
Score = 31.5 bits (68), Expect = 7.5
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 152 SNMVNMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNAN 331
SN N E+ SST+ + +E +N S++ + N+D ++ E N+N N+N
Sbjct: 675 SNSTNKQEENSSTKKEEISKSESNVNNSNSTNKQEENIDNKKEEISKSE-SNVN---NSN 730
Query: 332 ACHAGRTQNVQTQEEGD*Q 388
+ + TQN +T E + Q
Sbjct: 731 STN---TQNQETPETNESQ 746
>UniRef50_Q6MAW0 Cluster: Putative uncharacterized protein; n=33;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 1143
Score = 31.5 bits (68), Expect = 7.5
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 230 KLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHA 343
+LE S + N+D+LI+I+NF ++ +N + N C A
Sbjct: 125 ELELLSCIEDNLDELISILNFAHQRQLNILKNYLECAA 162
Score = 31.5 bits (68), Expect = 7.5
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 230 KLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHA 343
+LE S + N+D+LI ++NF K+ +N + N C A
Sbjct: 690 ELELLSCIEDNLDELIFVLNFARKRQLNILKNYLECAA 727
>UniRef50_A3YCB4 Cluster: General secretion pathway protein M; n=1;
Marinomonas sp. MED121|Rep: General secretion pathway
protein M - Marinomonas sp. MED121
Length = 171
Score = 31.5 bits (68), Expect = 7.5
Identities = 12/40 (30%), Positives = 27/40 (67%)
Frame = +3
Query: 288 ISWKKRTLTISSTLMPVMQDERKMSKRKKKVINNNKYILF 407
++W + + SS L+P++Q + +SKR++K++ ++LF
Sbjct: 1 MAWLEAQIRSSSLLLPLLQKYQALSKREQKLVACLAFVLF 40
>UniRef50_Q7REP6 Cluster: Maf-like protein, putative; n=3;
Plasmodium (Vinckeia)|Rep: Maf-like protein, putative -
Plasmodium yoelii yoelii
Length = 462
Score = 31.5 bits (68), Expect = 7.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 215 EKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHAGRTQNV 361
E+++N L S YNK+ +++ I N ++ + NYI N H G N+
Sbjct: 58 EEVINYLSSLIYNKNVKHKIVKINNLIDDQIYNYIETCN--HLGNITNL 104
>UniRef50_Q24I61 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 747
Score = 31.5 bits (68), Expect = 7.5
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 59 VSSSQTNCQAVGH*KNISSRIQAGRFKG-LQKSNMVNMPEQQSSTETAAVCXNEKLLNKL 235
+ + Q A + N S + +++ Q+ N +N +++S E A E ++
Sbjct: 285 IQNQQNYTNANVYTNNYSYEYDSNKYQNSFQEGNQLNNLQKESQQENQASNQYENHEIEI 344
Query: 236 ESSSYNKSNMDQLIAIVNFLEKKNINY 316
E + N SN ++ NFL+ ++ NY
Sbjct: 345 EQINDNSSNENKQQKATNFLQNQSFNY 371
>UniRef50_Q23RM7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2585
Score = 31.5 bits (68), Expect = 7.5
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 188 TETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNAN 331
TET + NEK+ N+ + S+ N++N+D+ + + K+N+N I N N
Sbjct: 1934 TETG-ITENEKIKNEKQKSNQNENNIDK----QSNISKRNLNIIKNEN 1976
>UniRef50_Q23QB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 701
Score = 27.9 bits (59), Expect(2) = 8.1
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 215 EKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHAGRTQNVQTQEE 376
EK L ++ + NK + I+ LE++ +++IL+++ +T+N+Q Q+E
Sbjct: 212 EKYLKSIKELNLNKKVILNQKKIIEQLEQR-LDFILSSDYLKNKQTKNIQKQDE 264
Score = 22.2 bits (45), Expect(2) = 8.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 143 LQKSNMVNMPEQQSSTETAAVCXNEKLLNKL 235
L+ S M+N+ +QS+ + N+KL +KL
Sbjct: 163 LELSKMINLSIKQSNKISQINLLNQKLNDKL 193
>UniRef50_Q8RHJ6 Cluster: ABC1 family protein; n=2; Fusobacterium
nucleatum|Rep: ABC1 family protein - Fusobacterium
nucleatum subsp. nucleatum
Length = 176
Score = 31.1 bits (67), Expect = 9.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 173 EQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYI 319
EQ+ + VC + L KL + K + L++++N + K N NY+
Sbjct: 39 EQKKQSRAVYVCKSLNCLGKLAKHNKVKLDSQDLMSMLNIINKANKNYL 87
>UniRef50_Q57S11 Cluster: Putative uncharacterized protein; n=1;
Salmonella choleraesuis|Rep: Putative uncharacterized
protein - Salmonella choleraesuis
Length = 528
Score = 31.1 bits (67), Expect = 9.9
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 149 KSNMVNMPEQQSSTETAAVCXNE----KLLNKLESSSYNKSNMDQLI--AIVNFLEKKNI 310
KSN+ N S T A+C + K ES SYNKSNM+ I I++ + I
Sbjct: 370 KSNIKNNVYSYSLTIAMAICMSAIAPVLYTTKAESFSYNKSNMNSEINKKIISIVRLTGI 429
Query: 311 NYI 319
YI
Sbjct: 430 KYI 432
>UniRef50_A4W1F6 Cluster: Putative uncharacterized protein; n=2;
Streptococcus suis|Rep: Putative uncharacterized protein
- Streptococcus suis (strain 98HAH33)
Length = 611
Score = 31.1 bits (67), Expect = 9.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 215 EKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHAGRT 352
+K +KL S +++ +L + LE KN+NY+ + H G+T
Sbjct: 512 DKFTDKLNSGIKDEATRRKLDIGIGLLENKNVNYLDSRKYIHIGKT 557
>UniRef50_Q8IKD8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 398
Score = 31.1 bits (67), Expect = 9.9
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 77 NCQAVGH*KNISSR-IQAGRFKGLQKSNMVNMPEQQSSTETAAVCXNEKLLNKLESSSYN 253
N Q K I+ + I+ G K N +NM + ST VC + N SS N
Sbjct: 315 NSQIYNINKKINKKGIKNGNMNKSDKMNKINMNGKNISTNQKNVCNSRSTSN----SSSN 370
Query: 254 KSNMDQLIAIVNFLEKKNI 310
S+M Q IV+F K NI
Sbjct: 371 SSDMSQ-EEIVSFSSKYNI 388
>UniRef50_Q8I5B0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 988
Score = 31.1 bits (67), Expect = 9.9
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 309 LTISSTLMPVMQDERKMSKRKKKV-INNNKYILFN 410
L I + V+ +E+K KRK+K+ I+ NK+IL N
Sbjct: 383 LVIEQNIEKVIVEEKKKRKRKEKINIDENKHILIN 417
>UniRef50_Q54XR3 Cluster: Inositol phosphate kinase; n=2;
Dictyostelium discoideum|Rep: Inositol phosphate kinase
- Dictyostelium discoideum AX4
Length = 716
Score = 31.1 bits (67), Expect = 9.9
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +2
Query: 227 NKLESSSYNKSNMDQ--LIAIVNFLE-KKNINYILNANACHAGRTQNVQTQEEG 379
N +E++S N +N + +I++ N + ++NIN L +N+C + ++ E+G
Sbjct: 488 NSVENNSNNNNNNNDNIIISVSNSISIQRNINKSLESNSCISSNNSMIEDMEDG 541
>UniRef50_O14802 Cluster: DNA-directed RNA polymerase III subunit
RPC1; n=17; Bilateria|Rep: DNA-directed RNA polymerase
III subunit RPC1 - Homo sapiens (Human)
Length = 1391
Score = 31.1 bits (67), Expect = 9.9
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +3
Query: 30 ITDKCSKRKVCLH---HKRIARLLGIKKIYHQEY---KRVVSKVYKN 152
I+DKC K+ +C H + G+ KI H++Y K+VV + N
Sbjct: 146 ISDKCRKKNICHHCGAFNGTVKKCGLLKIIHEKYKTNKKVVDPIVSN 192
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,905,752
Number of Sequences: 1657284
Number of extensions: 7573702
Number of successful extensions: 22173
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 21185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22146
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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