BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5a16
(427 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 25 1.5
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 25 1.5
AF283269-1|AAG15374.1| 114|Anopheles gambiae ribosomal protein ... 23 3.4
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 23 4.5
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 23 4.5
AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. 22 7.9
AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismuta... 22 7.9
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 24.6 bits (51), Expect = 1.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 125 AGRFKGLQKSNMVNMPEQQSSTETAAVCXNE 217
A K + ++ N P+QQS+T C N+
Sbjct: 118 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 148
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 24.6 bits (51), Expect = 1.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 125 AGRFKGLQKSNMVNMPEQQSSTETAAVCXNE 217
A K + ++ N P+QQS+T C N+
Sbjct: 119 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 149
>AF283269-1|AAG15374.1| 114|Anopheles gambiae ribosomal protein S26
protein.
Length = 114
Score = 23.4 bits (48), Expect = 3.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 40 NVLSVRCVFITNELPGCWALKKYIIKN 120
+V +VRC +P A+KK++I+N
Sbjct: 16 HVKAVRCTNCARCVPKDKAIKKFVIRN 42
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 23.0 bits (47), Expect = 4.5
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +2
Query: 224 LNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANACHAGRTQNVQTQEEGD*QQ 391
+NK ++ N ++ D I+ +E+ + +NAN C R N +G Q+
Sbjct: 698 VNKPKNRYANVTSYDHSRVILPPIERVPGSDYINANYCDGYRKHNAYVATQGPLQE 753
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 23.0 bits (47), Expect = 4.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -2
Query: 162 TMFDFCKPLKRPACILDDIFF*CPTAWQFVCD 67
TM DF P C+LD I + W C+
Sbjct: 150 TMVDFKLLQVIPYCVLDTITYMMGGYWYMACE 181
>AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein.
Length = 437
Score = 22.2 bits (45), Expect = 7.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 84 RLLGIKKIYHQEYKRVVSKVYKNQTW*TC 170
+L+ I +YH + V K YKN +C
Sbjct: 406 KLIPISVLYHIDESNVNLKKYKNMVVKSC 434
>AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismutase
2 protein.
Length = 211
Score = 22.2 bits (45), Expect = 7.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 425 LSVPTVKQNVFIVVNHLLLAFGHFAFVLHDR 333
+S P+ + VFI +N + L G F +H++
Sbjct: 39 ISQPSCTEPVFIDINVVGLTPGKHGFHIHEK 69
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,637
Number of Sequences: 2352
Number of extensions: 8350
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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