Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5a16
         (427 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    33   0.12 
AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA ...    31   0.85 
AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p pro...    28   4.5  
AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA ...    28   4.5  
AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    28   6.0  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    28   6.0  

>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +2

Query: 164  NMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNANAC 337
            N  +Q ++T TAA C N K  N L   S+  +N        + L+ ++ +  LN N C
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNNQATEAPNRSQLQSQSQSLSLNQNGC 1078


>AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA
           protein.
          Length = 1504

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +2

Query: 164 NMPEQQSSTETAAVCXNEKLLNKL-ESSSYNKSNMDQLIAIVNF-LEKKNINYILNANAC 337
           N  +Q ++T TAA C N    N L E S+  KS    +  ++ F L ++  ++ +N  A 
Sbjct: 472 NQQQQITTTSTAATCDNLMSANALSEVSATAKSTAIIVFMLIKFKLIRQQDSHTVNNQAT 531

Query: 338 HAGRTQNVQTQEE 376
            A     +Q+Q +
Sbjct: 532 EAPNRSQLQSQSQ 544


>AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p
           protein.
          Length = 880

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 348 ERKMSKRKKKVINNNKYILFNSWYTK 425
           E +  K KKK+  N+ Y L N W+T+
Sbjct: 42  EHRKPKTKKKISTNSYYELANLWHTR 67


>AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA
            protein.
          Length = 4056

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 9/43 (20%)
 Frame = +1

Query: 265  GPANCYCK--FLGKKEH*LYPQR*CLS-------CRTNAKCPN 366
            G   C CK  ++ K E+ LYP R CL+       C  N KC N
Sbjct: 3746 GSYTCSCKKGYVDKSENSLYPGRHCLNNIIGCDKCNYNGKCVN 3788


>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +2

Query: 110 SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVN 289
           SS   +  ++ L +S+    P   SS        +E   N LE S    S+MDQLI ++ 
Sbjct: 452 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 511

Query: 290 FLEK 301
            + K
Sbjct: 512 NMGK 515


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +2

Query: 110 SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCXNEKLLNKLESSSYNKSNMDQLIAIVN 289
           SS   +  ++ L +S+    P   SS        +E   N LE S    S+MDQLI ++ 
Sbjct: 723 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 782

Query: 290 FLEK 301
            + K
Sbjct: 783 NMGK 786


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,607,478
Number of Sequences: 53049
Number of extensions: 369921
Number of successful extensions: 1039
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)