Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5a12
         (369 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    27   0.22 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   0.52 
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   3.6  

>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
          S-transferase protein.
          Length = 235

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 29 VQSVPSQSLSFFVATNKLPF 88
          + S PS++L  F++TNK+PF
Sbjct: 11 LMSQPSRALYIFLSTNKIPF 30


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 102  SWSSQNGNLFVATKNDNDCD 43
            SW+ Q  NLF +T + N C+
Sbjct: 1616 SWNGQEFNLFCSTGSSNSCN 1635


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 95  HRKMAIYLWQRKTTMIVMEHF 33
           HR M+  L  RKT  ++++HF
Sbjct: 299 HRPMSKVLLFRKTANLLLDHF 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,287
Number of Sequences: 2352
Number of extensions: 7643
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)