Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5a02
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    30   0.067
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.83 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    27   0.83 
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    26   1.1  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    25   3.3  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    25   3.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   4.4  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   7.7  

>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 30.3 bits (65), Expect = 0.067
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -1

Query: 647 LKILSDTILESESIVWLHVLSVPSKCCFLRVISKNFF 537
           +K LS T + ++++ W HV+ V SK C++  +  +F+
Sbjct: 56  VKALS-TQVPNDTLTWQHVIEVASKKCYIITVGDSFY 91


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +1

Query: 493 SYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIV 672
           S A+ +L+  Q  E  +  ++   +  +E TE+   +    L  +     ++    E   
Sbjct: 488 SIAESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAK 547

Query: 673 QKLQENPEDKLALWXQLK 726
           QKLQEN  ++  L   L+
Sbjct: 548 QKLQENANEERELTQTLR 565


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 128  QKQTTSIRNWKTSFSPKHKNNVSRSL-FTVSQIPAGTHVWENHQHG 262
            +++ TS++ W+  +     NN SR L +   Q+P    +W   +HG
Sbjct: 877  EEKETSLQLWQQQWDDVAANNTSRYLRWAHRQVP-DVRLWTGRKHG 921


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 258 C*WFSHTCVPAGICETVNKDLETLFLCFGENEVFQ 154
           C W  H  VP G+ E V  DL  +   F ++ V Q
Sbjct: 584 CGWPQHMLVPKGLPEGVQFDLFAMVTDFEQDSVAQ 618


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 258 C*WFSHTCVPAGICETVNKDLETLFLCFGENEVFQ 154
           C W +H  +P G+ E +  DL  +   + E+ V Q
Sbjct: 582 CGWPAHMLIPKGLPEGLPADLFIMVSNYEEDRVVQ 616


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 258 C*WFSHTCVPAGICETVNKDLETLFLCFGENEVFQ 154
           C W +H  +P G+ E +  DL  +   + E+ V Q
Sbjct: 582 CGWPAHMLIPKGLPEGLPADLFIMVSNYEEDRVVQ 616


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/63 (17%), Positives = 31/63 (49%)
 Frame = +1

Query: 505 KKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIVQKLQ 684
           ++LR   ++  K F+E+ +KK H++       +   ++++ +S     L   ++ ++ + 
Sbjct: 442 EQLRVQIDEHNKNFYELKKKKDHYQSLRNDIWKKETAVTQTLSGYKEELARADQALRSMA 501

Query: 685 ENP 693
             P
Sbjct: 502 GKP 504


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -3

Query: 258 C*WFSHTCVPAGICETVNKDLETLFLCFGENEVFQ-LRIDVVC 133
           C W  H  +P G  E +  DL  +   F ++ V Q    D+ C
Sbjct: 583 CGWPHHLLLPKGTAEGMKFDLFLMISNFADDTVNQEFNEDINC 625


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,070
Number of Sequences: 2352
Number of extensions: 14728
Number of successful extensions: 44
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)