Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5a02
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024765-4|AAF60525.1| 83|Caenorhabditis elegans Human ddp rel... 77 2e-14
AF150086-1|AAD39993.1| 83|Caenorhabditis elegans small zinc fi... 75 5e-14
U56965-7|AAB52665.1| 122|Caenorhabditis elegans Peroxisome asse... 51 8e-07
AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical ... 36 0.023
Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical pr... 36 0.041
AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc fi... 36 0.041
U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to i... 31 0.67
U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to i... 31 0.67
AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc fi... 31 0.67
AL161712-17|CAC70139.1| 86|Caenorhabditis elegans Hypothetical... 30 2.0
AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical ... 30 2.0
AF150094-1|AAD40000.1| 86|Caenorhabditis elegans small zinc fi... 30 2.0
AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical ... 30 2.0
AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81514-4|CAB04191.1| 78|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 6.2
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 28 6.2
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 6.2
>AC024765-4|AAF60525.1| 83|Caenorhabditis elegans Human ddp
related protein 1 protein.
Length = 83
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = +1
Query: 136 DNVDPQLENFIL---AETQKQRFQVLVHGLTDTCWDTCMG--KPSTRLDSKTEVCIMNCV 300
D+ DPQL F+ AETQ+Q+F VH LT CWD C +P +++D KT+ CI NCV
Sbjct: 2 DSADPQLNRFLQQLQAETQRQKFTEQVHTLTGRCWDVCFADYRPPSKMDGKTQTCIQNCV 61
Query: 301 ERFIDATTYITKRL 342
R IDA+ ++ + L
Sbjct: 62 NRMIDASNFMVEHL 75
>AF150086-1|AAD39993.1| 83|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 83
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Frame = +1
Query: 136 DNVDPQLENFIL---AETQKQRFQVLVHGLTDTCWDTCMG--KPSTRLDSKTEVCIMNCV 300
D+ DPQL F+ AETQ+Q+F VH LT CWD C +P +++D KT+ C NCV
Sbjct: 2 DSADPQLNRFLQQLQAETQRQKFTEQVHTLTGRCWDVCFADYRPPSKMDGKTQTCFQNCV 61
Query: 301 ERFIDATTYITKRL 342
R IDA+ ++ + L
Sbjct: 62 NRMIDASNFMVEHL 75
>U56965-7|AAB52665.1| 122|Caenorhabditis elegans Peroxisome
assembly factor protein3 protein.
Length = 122
Score = 51.2 bits (117), Expect = 8e-07
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Frame = +1
Query: 403 MFSNIKNFLNRHRRKFFVTGAVVGGL--YVLTSYAQKKLRDWQEKEAKKFFEMTRKKQHF 576
M ++ F R++ K G +VG YV +S K L + + + R+ F
Sbjct: 1 MLASAWEFAKRNKGKIIAGGVLVGSAIAYVQSSSRPKTLE--KVSTSSELPNQARRHYIF 58
Query: 577 EGTERTCNQTILSLSKIVSESILSLLNTEEIVQKLQENP----EDKLALWXQLKI 729
+ T R+C+Q+I L + I + + E I +KLQ P E K+ LW QLK+
Sbjct: 59 DSTHRSCDQSITDLIPSIVTQIQARFDVESIQEKLQNTPDLTAEQKMQLWEQLKV 113
>AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical
protein Y116F11B.11 protein.
Length = 511
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 EKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIVQKLQENPEDK 702
EK+++KF ++ + Q + Q I + IVSE + L +EI +K+ E DK
Sbjct: 286 EKDSEKFLKVIQVVQQLRSLNKDSVQNIQQIPPIVSEFLKELATVKEIPKKMSEKSNDK 344
>Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical
protein DY3.1 protein.
Length = 108
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/82 (20%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 109 NQPLIMSETDNVDPQLENFILAETQKQ----RFQVLVHGLTDTCWDTCMGKPSTRLDSKT 276
+Q L + + P+ + +++ ++Q Q LV +++ C + C+ P + L S
Sbjct: 2 DQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGE 61
Query: 277 EVCIMNCVERFIDATTYITKRL 342
+ C+ C++RF+++ +++ L
Sbjct: 62 KQCLQRCMDRFMESWNLVSQTL 83
>AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 108
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/82 (20%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 109 NQPLIMSETDNVDPQLENFILAETQKQ----RFQVLVHGLTDTCWDTCMGKPSTRLDSKT 276
+Q L + + P+ + +++ ++Q Q LV +++ C + C+ P + L S
Sbjct: 2 DQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGE 61
Query: 277 EVCIMNCVERFIDATTYITKRL 342
+ C+ C++RF+++ +++ L
Sbjct: 62 KQCLQRCMDRFMESWNLVSQTL 83
>U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform b protein.
Length = 78
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 214 LTDTCWDTCMGKPSTR-LDSKTEVCIMNCVERFIDATTYITKR 339
+ + C+++C+ + +R + K E C NC+++F+ T +++R
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQR 62
>U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform a protein.
Length = 90
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 214 LTDTCWDTCMGKPSTR-LDSKTEVCIMNCVERFIDATTYITKR 339
+ + C+++C+ + +R + K E C NC+++F+ T +++R
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQR 62
>AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 90
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 214 LTDTCWDTCMGKPSTR-LDSKTEVCIMNCVERFIDATTYITKR 339
+ + C+++C+ + +R + K E C NC+++F+ T +++R
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQR 62
>AL161712-17|CAC70139.1| 86|Caenorhabditis elegans Hypothetical
protein Y66D12A.22 protein.
Length = 86
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 169 LAETQKQRFQVLVHGLTDTCWDTCMGKP--STRLDSKTEVCIMNCVERFIDATTYITKRL 342
+AE + + + +T++C C+ + L VC+ CV +++D + KRL
Sbjct: 10 VAELEVEMMSDMYRRMTNSCQAKCIATAFRESELTKGEAVCLDRCVAKYLDVHEKLGKRL 69
Query: 343 MSTTK 357
S ++
Sbjct: 70 TSMSQ 74
>AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical
protein Y51A2B.6 protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +1
Query: 526 EKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIVQKLQENPEDK 702
+++++ F ++ + Q ++ Q I + +VSE + +L EI K++EN +K
Sbjct: 553 KQDSEHFQKVIQVIQKMRNLDKDSVQNIQGIPSVVSEFLKNLAKVREISDKMKENSNNK 611
>AF150094-1|AAD40000.1| 86|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 86
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 169 LAETQKQRFQVLVHGLTDTCWDTCMGKP--STRLDSKTEVCIMNCVERFIDATTYITKRL 342
+AE + + + +T++C C+ + L VC+ CV +++D + KRL
Sbjct: 10 VAELEVEMMSDMYRRMTNSCQAKCIATAFRESELTKGEAVCLDRCVAKYLDVHEKLGKRL 69
Query: 343 MSTTK 357
S ++
Sbjct: 70 TSMSQ 74
>AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical
protein ZK1055.6a protein.
Length = 531
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 457 TGAVVGGLYVLTSYAQKKLRDWQEKEAKKFFEMTRKKQH-FEGTERTCNQTILSLSKIVS 633
+G+VV +LT +KL D+QE E K E R+K+H T ++ L+++V+
Sbjct: 101 SGSVVIDENLLTGL--QKLLDFQETEMNKLNEQLREKEHEILKTIEMASKIGNELNRLVN 158
Query: 634 ESILSLLNTEEIVQKLQENPEDKLALWXQL 723
I ++ +T I + E+ + +L + Q+
Sbjct: 159 SGISNMSHTVFITLEAFEDGDVELDITYQV 188
>AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical
protein ZK1055.6b protein.
Length = 564
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 457 TGAVVGGLYVLTSYAQKKLRDWQEKEAKKFFEMTRKKQH-FEGTERTCNQTILSLSKIVS 633
+G+VV +LT +KL D+QE E K E R+K+H T ++ L+++V+
Sbjct: 134 SGSVVIDENLLTGL--QKLLDFQETEMNKLNEQLREKEHEILKTIEMASKIGNELNRLVN 191
Query: 634 ESILSLLNTEEIVQKLQENPEDKLALWXQL 723
I ++ +T I + E+ + +L + Q+
Sbjct: 192 SGISNMSHTVFITLEAFEDGDVELDITYQV 221
>Z81514-4|CAB04191.1| 78|Caenorhabditis elegans Hypothetical
protein F26F2.5 protein.
Length = 78
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/71 (21%), Positives = 35/71 (49%)
Frame = +1
Query: 487 LTSYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEE 666
++SY Q ++ + + + + ++TR+ + R +Q + I SE+ L + +
Sbjct: 1 MSSYNQLRMAEMMDNQNARQNDLTRRMMEMNNSARLSDQARDDRNAIRSENNLKEVYNKL 60
Query: 667 IVQKLQENPED 699
+ + +ENP D
Sbjct: 61 VKAQKKENPSD 71
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 493 SYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSK 624
S+ + L+DW EK FE++RKK TC + ++ + +
Sbjct: 707 SHELEPLQDWSEK-----FEVSRKKDDIRKMMNTCQEKLIQIKE 745
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 493 SYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSK 624
S+ + L+DW EK FE++RKK TC + ++ + +
Sbjct: 707 SHELEPLQDWSEK-----FEVSRKKDDIRKMMNTCQEKLIQIKE 745
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 529 KEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIVQK 678
K KF + + +E +T N + LSLSKI++++ L++T + ++K
Sbjct: 469 KIINKFTMLKSLQTQYESAYKTSNSSELSLSKIITDA--GLVDTSKCLEK 516
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 493 SYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSK 624
S+ + L+DW EK FE++RKK TC + ++ + +
Sbjct: 707 SHELEPLQDWSEK-----FEVSRKKDDIRKMMNTCQEKLIQIKE 745
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,686,526
Number of Sequences: 27780
Number of extensions: 349309
Number of successful extensions: 1085
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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