Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5a01
(208 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 109 1e-23
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 103 1e-21
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 99 1e-20
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 86 2e-16
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 67 8e-11
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 66 1e-10
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 64 8e-10
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 61 6e-09
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 58 5e-08
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 56 1e-07
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 56 2e-07
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 55 3e-07
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 55 4e-07
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 54 5e-07
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 52 3e-06
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 50 1e-05
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 48 6e-05
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 46 2e-04
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 45 4e-04
UniRef50_Q4QE06 Cluster: GPI-anchor transamidase subunit 8 (GPI8... 34 0.55
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 34 0.73
UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG122... 33 0.96
UniRef50_A4PID3 Cluster: Chitinase; n=1; Monochamus alternatus|R... 33 1.7
UniRef50_Q0SSU7 Cluster: Bacterial membrane flanked domain famil... 30 9.0
UniRef50_A5IIX8 Cluster: O-antigen polymerase; n=2; Thermotoga|R... 30 9.0
UniRef50_Q6IHQ1 Cluster: HDC01725; n=1; Drosophila melanogaster|... 30 9.0
UniRef50_Q2NFR1 Cluster: Putative uncharacterized protein; n=1; ... 30 9.0
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 109 bits (262), Expect = 1e-23
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 117 IKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILP 176
Query: 183 SK 188
K
Sbjct: 177 GK 178
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 103 bits (246), Expect = 1e-21
Identities = 44/62 (70%), Positives = 54/62 (87%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGIYGLDFYVVLGR GF++A ++R+TG +G HR++KE+AM+WFQQKY GIIL
Sbjct: 171 IKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYAGIILP 230
Query: 183 SK 188
K
Sbjct: 231 GK 232
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 99 bits (238), Expect = 1e-20
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPS GIYG+DFYVVL RPG+ VA RRR +VG HR+TK+DAMKWFQ KY+G+ILN
Sbjct: 116 IKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILN 175
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 85.8 bits (203), Expect = 2e-16
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGI+G+DFYVV+ RPG V R+R G VG H+ TKED + WF+QKYD +L+
Sbjct: 114 IKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLD 173
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 66.9 bits (156), Expect = 8e-11
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +3
Query: 6 KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 164
KYDP IGIYG+D VVL RPG V+ RRR+ KVG HR+ K+++ WF+ ++
Sbjct: 109 KYDPDIGIYGMDVNVVLERPGHRVSRRRRRGVKVGVEHRVGKDESKAWFKDQF 161
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 66.5 bits (155), Expect = 1e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQK 161
+KYDP +G+ GL+ YV L RPG+ V RR K KVG HRL KE+ +KW Q++
Sbjct: 111 MKYDPELGLIGLEAYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIKWAQEE 163
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 63.7 bits (148), Expect = 8e-10
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQ 155
+ YDP +GI+G+D V L R G+ VA RRRK K+ HR+TKED ++W +
Sbjct: 121 VDYDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLE 171
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 60.9 bits (141), Expect = 6e-09
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 6 KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQ 155
+YDP++GI+G D V L RPGF V +RRR VG HR+++E+ +++FQ
Sbjct: 138 RYDPALGIFGFDVAVTLARPGFRVQYRRRARADVGKDHRVSREETIRFFQ 187
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 57.6 bits (133), Expect = 5e-08
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +3
Query: 6 KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 164
+YDP +GI+G+D + + RPG+ VA RRR K+ HR+TKE++M + +++
Sbjct: 140 RYDPRVGIFGMDVILTIERPGYRVARRRRARSKIPRRHRVTKEESMVFLAKEF 192
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 56.4 bits (130), Expect = 1e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 6 KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 167
+YDPSIGIYGLD V L RPG+ VA R + + + HRL DA+ + + YD
Sbjct: 119 EYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYD 172
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 56.0 bits (129), Expect = 2e-07
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 164
++YDP+IG++G+D VVL RPG + RR T K+ HR+T +DA+ + + Y
Sbjct: 111 MRYDPNIGVFGMDVTVVLKRPGERICKRRIATRKIPTDHRVTVDDAIAFLNESY 164
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 164
+KYDP+IG++G+D VV+ RPG + RR T K+ HR+T ED++ + Y
Sbjct: 111 MKYDPNIGVFGMDVTVVIKRPGERICKRRIATRKIPTNHRVTLEDSIAFLNDSY 164
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +3
Query: 6 KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 167
KYDPS+GIYG+D V + G+ V R+ K + H +TK++A+++ Q K+D
Sbjct: 122 KYDPSVGIYGMDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFD 175
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 54.4 bits (125), Expect = 5e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 167
+KY+P IGI+G++ V +PG+ +A RR + KV HR++KE+ MK+ + ++
Sbjct: 110 MKYNPDIGIFGMNVSVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFN 164
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 164
IKYDP IGI GLD + L RPG+ + R + +VG HR+T +A + +++
Sbjct: 111 IKYDPGIGILGLDVCMTLSRPGYGIRKRSKHKARVGRSHRITATEAKDFVVREF 164
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 50.0 bits (114), Expect = 1e-05
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRR-KTGKVGFPHRLTKEDAMKWFQQKY 164
+KYDP +GI G+D + + RPG + RRR + G + HR+T+E+ M Q +
Sbjct: 133 VKYDPRVGILGMDVAITIQRPGHRIVERRRQRRGHIPRRHRVTREETMVLLNQLF 187
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 47.6 bits (108), Expect = 6e-05
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 164
+KY+PSIGI GL V L RPG+ + R + VG H +T ++A + +++
Sbjct: 115 VKYEPSIGILGLGISVTLTRPGYGIRTRSKHKASVGKSHIITSQEAKDYLVKEF 168
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVL-GRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 167
+KYDP IGI+G+D +V R G+ + RR K + R++KE+ +K+ Q+ ++
Sbjct: 115 MKYDPDIGIFGMDIAIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIKYLQENFN 170
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 84 RRRKTGKVGFPHRLTKEDAMKWFQQKYDGII 176
RRR + F HR+TK+DAMKWFQ KY+G+I
Sbjct: 18 RRRCRLVLVFQHRVTKDDAMKWFQVKYEGVI 48
>UniRef50_Q4QE06 Cluster: GPI-anchor transamidase subunit 8 (GPI8),
putative; n=8; Trypanosomatidae|Rep: GPI-anchor
transamidase subunit 8 (GPI8), putative - Leishmania
major
Length = 357
Score = 34.3 bits (75), Expect = 0.55
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 179 KYDTIIFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYD 48
+Y ++F+ + H+I LCE V + CL S E++ +YD
Sbjct: 213 RYGRVVFMADTCHAIALCEHVEAPNVVCLAASDAESESYSCQYD 256
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 33.9 bits (74), Expect = 0.73
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -3
Query: 191 CFAIKYDTIIFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYDVKVQSINSN*GI 12
C ++ +I+ LLEP +FL V + F + S TW +V++ ++N++ +
Sbjct: 3 CLFVQNFSIVSLLEPSDGVFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWV 62
Query: 11 VLD 3
VLD
Sbjct: 63 VLD 65
>UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG12266;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG12266 - Caenorhabditis
briggsae
Length = 418
Score = 33.5 bits (73), Expect = 0.96
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 34 DWTFTSYLAGQVST*HTEGVRQEKWDFPTASQRKML 141
DWTFT++ G V+ E ++EKWDF S +K L
Sbjct: 383 DWTFTTHYKGTVNGLKVE--KREKWDFRKNSAKKSL 416
>UniRef50_A4PID3 Cluster: Chitinase; n=1; Monochamus alternatus|Rep:
Chitinase - Monochamus alternatus (Japanese pine sawyer)
Length = 371
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 146 LHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYD 48
L S+ +C AV HF+ T +CY E+W A YD
Sbjct: 3 LKSLLICLAVFIQHFAAGTKVICYYESWNA-YD 34
>UniRef50_Q0SSU7 Cluster: Bacterial membrane flanked domain family;
n=3; Clostridium perfringens|Rep: Bacterial membrane
flanked domain family - Clostridium perfringens (strain
SM101 / Type A)
Length = 155
Score = 30.3 bits (65), Expect = 9.0
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 205 LIFYFALLLSMIPSYFCWNHFIASSFVR-RWG 113
+IF ++L+ I YF W++FI S F+ R+G
Sbjct: 61 VIFIISVLICPIIKYFTWSYFIFSDFIEIRYG 92
>UniRef50_A5IIX8 Cluster: O-antigen polymerase; n=2; Thermotoga|Rep:
O-antigen polymerase - Thermotoga petrophila RKU-1
Length = 1065
Score = 30.3 bits (65), Expect = 9.0
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 187 LLLSMIPSYFCWNHFIASSFVRRWGNPTFPVLR 89
LL+ ++ +Y WN+FI+ + +WGN + +R
Sbjct: 462 LLVGVVSAYLKWNYFISEVYF-KWGNSAYLSIR 493
>UniRef50_Q6IHQ1 Cluster: HDC01725; n=1; Drosophila
melanogaster|Rep: HDC01725 - Drosophila melanogaster
(Fruit fly)
Length = 102
Score = 30.3 bits (65), Expect = 9.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 172 IPSYFCWNHFIASSFVRRWGNPTFPVLRLL 83
IP++ WN+ + + GNP FP L+LL
Sbjct: 51 IPTHSRWNYAVPGEAIPTIGNPDFPPLQLL 80
>UniRef50_Q2NFR1 Cluster: Putative uncharacterized protein; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Putative
uncharacterized protein - Methanosphaera stadtmanae
(strain DSM 3091)
Length = 80
Score = 30.3 bits (65), Expect = 9.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 205 LIFYFALLLSMIPSYFCWNHFIASSFVRRWGNPTFPVL 92
+I ++ L L + F + +FI F W NP+ PVL
Sbjct: 1 MILFYLLFLLLFHLLFLYFNFIMILFYFSWSNPSIPVL 38
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,864,976
Number of Sequences: 1657284
Number of extensions: 4098043
Number of successful extensions: 10877
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10876
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 10452637923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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