Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5a01
         (208 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048...   100   2e-22
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576...   100   2e-22
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656...    97   1e-21
02_02_0196 + 7685933-7685961,7686086-7686284                           97   2e-21
01_06_0957 - 33352904-33353212,33353316-33353465,33353544-333536...    27   2.7  
05_03_0249 - 10946993-10947073,10947307-10947432,10948497-109485...    25   6.3  
02_05_0792 - 31777775-31778220,31778506-31778630,31778724-317789...    25   6.3  

>06_03_0409 -
           20503480-20503678,20504522-20504717,20504805-20504847,
           20505632-20505739,20505848-20505850
          Length = 182

 Score =  100 bits (239), Expect = 2e-22
 Identities = 47/68 (69%), Positives = 54/68 (79%)
 Frame = +3

Query: 3   IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
           IKYDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G+ILN
Sbjct: 116 IKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILN 175

Query: 183 SKAK*NIS 206
            KA+ N S
Sbjct: 176 -KAQANTS 182


>01_01_0745 +
           5769150-5769152,5769268-5769375,5769812-5769854,
           5769945-5770140,5770836-5771034
          Length = 182

 Score =  100 bits (239), Expect = 2e-22
 Identities = 47/68 (69%), Positives = 54/68 (79%)
 Frame = +3

Query: 3   IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
           IKYDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G+ILN
Sbjct: 116 IKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILN 175

Query: 183 SKAK*NIS 206
            KA+ N S
Sbjct: 176 -KAQANTS 182


>05_02_0095 +
           6564703-6564705,6564848-6564955,6565153-6565195,
           6565303-6565409,6566310-6566395,6566396-6566594
          Length = 181

 Score = 97.5 bits (232), Expect = 1e-21
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = +3

Query: 6   KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNS 185
           +YDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G+ILN 
Sbjct: 116 RYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILN- 174

Query: 186 KAK*NIS 206
           KA+ N S
Sbjct: 175 KAQANTS 181


>02_02_0196 + 7685933-7685961,7686086-7686284
          Length = 75

 Score = 96.7 bits (230), Expect = 2e-21
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = +3

Query: 9   YDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 188
           YDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G+ILN K
Sbjct: 11  YDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILN-K 69

Query: 189 AK*NIS 206
           A+ N S
Sbjct: 70  AQANTS 75


>01_06_0957 -
           33352904-33353212,33353316-33353465,33353544-33353684,
           33354116-33354709
          Length = 397

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 28  FMDWTFTSYLAGQVS--T*HTEGVRQEKWDFPTASQRKML*SGSN 156
           F +W  T+  A  ++  T  T G   ++W   TA+ R+ML  GS+
Sbjct: 106 FPEWLITALFAVFLASATFKTYGTGMKRWRAETAAARRMLEGGSS 150


>05_03_0249 -
           10946993-10947073,10947307-10947432,10948497-10948552,
           10949066-10949338,10951434-10951716
          Length = 272

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 48  VVLGRPGFNVAHRRRKTGKVG 110
           VVLG  G+++A  RR+ G +G
Sbjct: 54  VVLGSSGYSIAKIRRRVGDLG 74


>02_05_0792 -
           31777775-31778220,31778506-31778630,31778724-31778911,
           31779716-31779892
          Length = 311

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -1

Query: 193 FALLLSMIPS--YFCWNHF-IASSFVRRWGNPTFPVLRLLCATLK 68
           F +L S+ PS  +F +    I  S + R+G   FP L LL +T++
Sbjct: 99  FEILASLFPSIRHFAFEESSIRPSIISRYGIHGFPTLFLLNSTMR 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,181,393
Number of Sequences: 37544
Number of extensions: 113279
Number of successful extensions: 313
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 14,793,348
effective HSP length: 48
effective length of database: 12,991,236
effective search space used: 259824720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)