Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5a01
(208 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 109 2e-24
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 109 2e-24
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 109 2e-24
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 109 2e-24
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 109 2e-24
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 109 2e-24
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 107 5e-24
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 96 2e-20
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 41 8e-04
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 109 bits (262), Expect = 2e-24
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 117 IKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILP 176
Query: 183 SK 188
K
Sbjct: 177 GK 178
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 109 bits (262), Expect = 2e-24
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 116 IKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILP 175
Query: 183 SK 188
K
Sbjct: 176 GK 177
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 109 bits (262), Expect = 2e-24
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 116 IKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILP 175
Query: 183 SK 188
K
Sbjct: 176 GK 177
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 109 bits (262), Expect = 2e-24
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 117 IKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILP 176
Query: 183 SK 188
K
Sbjct: 177 GK 178
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 109 bits (262), Expect = 2e-24
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 115 IKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILP 174
Query: 183 SK 188
K
Sbjct: 175 GK 176
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 109 bits (262), Expect = 2e-24
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
IKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 116 IKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILP 175
Query: 183 SK 188
K
Sbjct: 176 GK 177
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 107 bits (258), Expect = 5e-24
Identities = 45/62 (72%), Positives = 56/62 (90%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 182
I+YDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 117 IEYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILP 176
Query: 183 SK 188
K
Sbjct: 177 GK 178
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 179
IKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQK I L
Sbjct: 115 IKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKVKLIYL 173
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 IKYDPSIGIYGLDFYVV 53
IKYDPSIGIYGLDFYVV
Sbjct: 115 IKYDPSIGIYGLDFYVV 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,828,933
Number of Sequences: 237096
Number of extensions: 732092
Number of successful extensions: 9044
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9044
length of database: 76,859,062
effective HSP length: 47
effective length of database: 65,715,550
effective search space used: 1380026550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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