Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4p20
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119508-1|AAM50162.1|  952|Drosophila melanogaster GH12469p pro...    29   5.0  
AE014297-3031|AAF55912.3|  952|Drosophila melanogaster CG31233-P...    29   5.0  

>AY119508-1|AAM50162.1|  952|Drosophila melanogaster GH12469p
           protein.
          Length = 952

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = -3

Query: 537 ISLQT-LHSYKTELSTNKFITLTVLLIVSSFSINNRQFDINSFTYICIEFIFLKQHAKEF 361
           +SL T +H+  T  +    ITL+VL   +   ++ RQ +  +FT   I+    +  A+E 
Sbjct: 69  VSLSTNVHTGDTVFNGTVAITLSVLNTTTKIVVHARQLE--NFTASIIQQGVTEAVAQEL 126

Query: 360 LISFNASRNCFKYG*NTITLPRSRT 286
           +  + A R    +    +T P   T
Sbjct: 127 VYEYEAEREFLTFSKTGLTFPEDTT 151


>AE014297-3031|AAF55912.3|  952|Drosophila melanogaster CG31233-PA
           protein.
          Length = 952

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = -3

Query: 537 ISLQT-LHSYKTELSTNKFITLTVLLIVSSFSINNRQFDINSFTYICIEFIFLKQHAKEF 361
           +SL T +H+  T  +    ITL+VL   +   ++ RQ +  +FT   I+    +  A+E 
Sbjct: 69  VSLSTNVHTGDTVFNGTVAITLSVLNTTTKIVVHARQLE--NFTASIIQQGVTEAVAQEL 126

Query: 360 LISFNASRNCFKYG*NTITLPRSRT 286
           +  + A R    +    +T P   T
Sbjct: 127 VYEYEAEREFLTFSKTGLTFPEDTT 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,292,571
Number of Sequences: 53049
Number of extensions: 542057
Number of successful extensions: 1386
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)