Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4p19
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              29   0.059
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    24   1.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.0  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 28.7 bits (61), Expect = 0.059
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +3

Query: 381 RCSCKDEGSIPSERCRFSKLHSFGNGLYNIRRGLHLSEASVRS*TICHYPLENERTR 551
           R +C    S+   R      H   N   +IRR LH++  S+++  I  YP    R +
Sbjct: 133 RAACHSGSSLTKSRLMRCLHHDIENA--HIRRTLHMNRTSLKTSKIVSYPKSRSRKK 187


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 328 TPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGS 432
           TP+ H  +Y G +  P P+   R +    L V+GS
Sbjct: 32  TPVIHFLQYPGCVPKPIPSYACRGRCSSYLQVSGS 66


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 685 LYLCSRLRMRRRVDLDNRSVI*STDHK 605
           +YL +R R+R R      + + ST H+
Sbjct: 219 IYLATRRRLRERARQSRINAVQSTRHR 245


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 685 LYLCSRLRMRRRVDLDNRSVI*STDHK 605
           +YL +R R+R R      + + ST H+
Sbjct: 219 IYLATRRRLRERARQSRINAVQSTRHR 245


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 685 LYLCSRLRMRRRVDLDNRSVI*STDHK 605
           +YL +R R+R R      + + ST H+
Sbjct: 219 IYLATRRRLRERARQSRINAVQSTRHR 245


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 459 VRCQNCVAC*TGNAQRESNLHPC 391
           V  Q C  C  G  + E+  H C
Sbjct: 257 VEKQECTECPIGKFKHEAGSHSC 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,460
Number of Sequences: 438
Number of extensions: 4700
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)