Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4p07
         (248 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    26   0.18 
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    26   0.18 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    22   3.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    22   3.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    22   3.8  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    21   5.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    21   6.7  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 91  GGCRLTKEGRTGPGGKPSSQKSPHRA 168
           GG     +  T PGGKP    SP  A
Sbjct: 334 GGVAFFPDAATNPGGKPWKNNSPQAA 359


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 91  GGCRLTKEGRTGPGGKPSSQKSPHRA 168
           GG     +  T PGGKP    SP  A
Sbjct: 334 GGVAFFPDAATNPGGKPWKNNSPQAA 359


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 146 LLGFPPGPVRPSLVNLHPP 90
           LL  P GP+ P ++ + PP
Sbjct: 101 LLMGPNGPLPPPMMGMRPP 119


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -1

Query: 140 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHG 30
           G P  P RP +  +       G I  PG++    Q G
Sbjct: 170 GHPGAPGRPGVDGVKGLPGLKGDIGAPGVIGLPGQKG 206


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +2

Query: 122 PGQGGNPAAKSPRIGQ*WDSGR 187
           P    NP  +SPR G  W S R
Sbjct: 251 PPSRRNPRRRSPRSGGRWPSCR 272


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -1

Query: 194 STPGRYPTTARCGDFWLLGFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSS 39
           S+ G  PT A  G    +G   G    +     PP   GG    PG V TSS
Sbjct: 329 SSVGGAPTGAAAGS---VGTASGEQHCTGDTGKPPKPPGGKRHEPGFVLTSS 377


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -1

Query: 212 LGCH*ASTPGRYPTTARCGDFW 147
           +GCH    P  YPT       W
Sbjct: 543 MGCHRDIDPEEYPTLLHFAARW 564


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,326
Number of Sequences: 2352
Number of extensions: 5255
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)