Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4p07
(248 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058486-1|AAL13715.1| 416|Drosophila melanogaster GM13876p pro... 29 1.1
AE014296-1806|AAF50165.3| 416|Drosophila melanogaster CG32056-P... 29 1.1
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 27 2.6
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 27 2.6
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 27 2.6
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 27 2.6
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 27 2.6
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 27 2.6
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 27 2.6
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA... 27 2.6
AY071573-1|AAL49195.1| 479|Drosophila melanogaster RE63406p pro... 27 4.6
AE014297-2380|AAF55445.1| 210|Drosophila melanogaster CG14323-P... 27 4.6
AE013599-788|AAF58985.3| 453|Drosophila melanogaster CG8069-PA,... 27 4.6
Y15249-1|CAA75533.1| 555|Drosophila melanogaster RNA binding pr... 26 8.0
BT024440-1|ABC86502.1| 142|Drosophila melanogaster IP02048p pro... 26 8.0
AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p pro... 26 8.0
AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA ... 26 8.0
>AY058486-1|AAL13715.1| 416|Drosophila melanogaster GM13876p
protein.
Length = 416
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGG 75
G+PPGP P PPN+FGG
Sbjct: 132 GYPPGPAGPG----GPPNAFGG 149
>AE014296-1806|AAF50165.3| 416|Drosophila melanogaster CG32056-PA,
isoform A protein.
Length = 416
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGG 75
G+PPGP P PPN+FGG
Sbjct: 132 GYPPGPAGPG----GPPNAFGG 149
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXSTSRS*P 3
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 157 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 201
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 106 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 192
T G +GPGG P Q+SPH PG+
Sbjct: 339 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 366
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXSTSRS*P 3
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 106 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 192
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXSTSRS*P 3
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 106 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 192
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXSTSRS*P 3
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 106 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 192
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXSTSRS*P 3
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 106 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 192
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXSTSRS*P 3
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 106 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 192
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 140 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXSTSRS*P 3
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 106 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 192
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
protein.
Length = 1118
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 143 LGFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXS 21
+G PPG +P V ++PP++ + P T S H P S
Sbjct: 624 IGHPPGSQKPPNVGIYPPST---GWIPPSGPLTQSGHPPGS 661
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 143 LGFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXS 21
+G PPG +P ++PP++ GSI G + T H P S
Sbjct: 742 IGHPPGSQKPPNSGIYPPST--GSIPPSGPL-TQGGHPPGS 779
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 143 LGFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPXS 21
+G PPG +P ++PP++ GSI G + T H P S
Sbjct: 978 IGHPPGSQKPPNSGIYPPST--GSIPPSGPL-TQGGHPPGS 1015
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 143 LGFPPGPVRPSLVNLHPPNSFGGSI 69
+G PPG +P V ++PP++ GSI
Sbjct: 860 IGHPPGSQKPPNVGIYPPST--GSI 882
>AY071573-1|AAL49195.1| 479|Drosophila melanogaster RE63406p
protein.
Length = 479
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 94 GC-RLTKEGRTGPGGKPSSQKSPHRAVVG*RPGVDAQ*QPNQ 216
GC + + TGP G +K R V+ P DA+ QPN+
Sbjct: 96 GCIKKLRTESTGPDGHKKRKKRIRRTVMRRVPPTDAEMQPNR 137
>AE014297-2380|AAF55445.1| 210|Drosophila melanogaster CG14323-PA
protein.
Length = 210
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 58 PGVNMDPPKEFGGCRLTKEGRTGPGGKPSSQKSP 159
P M PP G + + G +GPG P + P
Sbjct: 154 PPPGMPPPTSVGTVQASAGGYSGPGAGPGQRPGP 187
>AE013599-788|AAF58985.3| 453|Drosophila melanogaster CG8069-PA,
isoform A protein.
Length = 453
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 94 GC-RLTKEGRTGPGGKPSSQKSPHRAVVG*RPGVDAQ*QPNQ 216
GC + + TGP G +K R V+ P DA+ QPN+
Sbjct: 70 GCIKKLRTESTGPDGHKKRKKRIRRTVMRRVPPTDAEMQPNR 111
>Y15249-1|CAA75533.1| 555|Drosophila melanogaster RNA binding
protein protein.
Length = 555
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 95 PPNSFGGSILTPGLVRTSSQHGP 27
PP+S GG + T GLV SS GP
Sbjct: 72 PPSSAGGDVTTIGLV--SSDDGP 92
>BT024440-1|ABC86502.1| 142|Drosophila melanogaster IP02048p
protein.
Length = 142
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 170 TARCGDFWLLGFPPGPVRPSLVNLHPPNSFGGSILTPG 57
+ARC FWL PG P + + P FG S L PG
Sbjct: 31 SARCF-FWL----PGSTMPHQLPVQLPAQFGPSSLCPG 63
>AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p protein.
Length = 1674
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 197 ASTPGRYPTTARCGDFWLLGFPPGPVRPSLVNLHPPN 87
AS+PGR P+TA+ + P P P+ V+ H N
Sbjct: 978 ASSPGRKPSTAKPISTSYVTGPSTPRPPATVDYHYDN 1014
>AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA
protein.
Length = 1629
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 197 ASTPGRYPTTARCGDFWLLGFPPGPVRPSLVNLHPPN 87
AS+PGR P+TA+ + P P P+ V+ H N
Sbjct: 933 ASSPGRKPSTAKPISTSYVTGPSTPRPPATVDYHYDN 969
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,845,560
Number of Sequences: 53049
Number of extensions: 289485
Number of successful extensions: 817
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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