Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4o21
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103846-1|AAI03847.1| 127|Homo sapiens keratin associated prot... 33 0.65
BC103845-1|AAI03846.1| 127|Homo sapiens keratin associated prot... 33 0.65
AJ406942-1|CAC27581.1| 127|Homo sapiens keratin associated prot... 33 0.65
BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X menta... 32 2.0
BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X menta... 32 2.0
AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing ... 32 2.0
AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protei... 32 2.0
AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated prot... 32 2.0
AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein. 32 2.0
AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated prot... 31 3.5
AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated prot... 31 3.5
BC130562-1|AAI30563.1| 195|Homo sapiens keratin associated prot... 30 6.1
BC126131-1|AAI26132.1| 195|Homo sapiens keratin associated prot... 30 6.1
BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription f... 30 6.1
AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription f... 30 6.1
AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription f... 30 6.1
AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription f... 30 6.1
AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription f... 30 6.1
AJ406945-1|CAC27584.1| 193|Homo sapiens keratin associated prot... 30 6.1
AJ406944-1|CAC27583.1| 195|Homo sapiens keratin associated prot... 30 6.1
AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated prot... 30 6.1
AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription f... 30 6.1
BC126423-1|AAI26424.1| 210|Homo sapiens keratin associated prot... 30 8.0
BC126421-1|AAI26422.1| 210|Homo sapiens keratin associated prot... 30 8.0
BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein. 30 8.0
BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associat... 30 8.0
AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associat... 30 8.0
AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associat... 30 8.0
AJ406939-1|CAC27578.1| 210|Homo sapiens keratin associated prot... 30 8.0
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 8.0
>BC103846-1|AAI03847.1| 127|Homo sapiens keratin associated protein
4-10 protein.
Length = 127
Score = 33.5 bits (73), Expect = 0.65
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = -1
Query: 532 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNIC 353
CCQ CC V + R C +TT C T T R C +C +T + S+ C
Sbjct: 29 CCQTTCCCPSCVVSSCCRPSC---SQTTCCQT-TCCRPSCCRPVCCQTTCRPSCGVSSCC 84
Query: 352 NTRRILI*VLSRPPCTRPRSHRPL 281
R + RP C RPL
Sbjct: 85 --RPLCCQTTCRPSCGVSSCCRPL 106
>BC103845-1|AAI03846.1| 127|Homo sapiens keratin associated protein
4-10 protein.
Length = 127
Score = 33.5 bits (73), Expect = 0.65
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = -1
Query: 532 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNIC 353
CCQ CC V + R C +TT C T T R C +C +T + S+ C
Sbjct: 29 CCQTTCCCPSCVVSSCCRPSC---SQTTCCQT-TCCRPSCCRPVCCQTTCRPSCGVSSCC 84
Query: 352 NTRRILI*VLSRPPCTRPRSHRPL 281
R + RP C RPL
Sbjct: 85 --RPLCCQTTCRPSCGVSSCCRPL 106
>AJ406942-1|CAC27581.1| 127|Homo sapiens keratin associated protein
4.10 protein.
Length = 127
Score = 33.5 bits (73), Expect = 0.65
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = -1
Query: 532 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNIC 353
CCQ CC V + R C +TT C T T R C +C +T + S+ C
Sbjct: 29 CCQTTCCCPSCVVSSCCRPSC---SQTTCCQT-TCCRPSCCRPVCCQTTCRPSCGVSSCC 84
Query: 352 NTRRILI*VLSRPPCTRPRSHRPL 281
R + RP C RPL
Sbjct: 85 --RPLCCQTTCRPSCGVSSCCRPL 106
>BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 37 KADLIPDEND--PXNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNI 210
K+D IP N N N + D+D + TTP+++ N+ K E LNI
Sbjct: 180 KSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGCENLNI 239
Query: 211 ESDIIKTEQTDAP 249
D I ++T P
Sbjct: 240 VQDKIMQQETSVP 252
>BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 37 KADLIPDEND--PXNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNI 210
K+D IP N N N + D+D + TTP+++ N+ K E LNI
Sbjct: 180 KSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGCENLNI 239
Query: 211 ESDIIKTEQTDAP 249
D I ++T P
Sbjct: 240 VQDKIMQQETSVP 252
>AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing
gene 1 protein.
Length = 695
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 37 KADLIPDEND--PXNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNI 210
K+D IP N N N + D+D + TTP+++ N+ K E LNI
Sbjct: 180 KSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGCENLNI 239
Query: 211 ESDIIKTEQTDAP 249
D I ++T P
Sbjct: 240 VQDKIMQQETSVP 252
>AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protein,
82kD protein.
Length = 695
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 37 KADLIPDEND--PXNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNI 210
K+D IP N N N + D+D + TTP+++ N+ K E LNI
Sbjct: 180 KSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGCENLNI 239
Query: 211 ESDIIKTEQTDAP 249
D I ++T P
Sbjct: 240 VQDKIMQQETSVP 252
>AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated protein
4.4 protein.
Length = 166
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -1
Query: 532 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 392
CCQ CC V + R +CC +TT C T T R C S C R
Sbjct: 115 CCQPTCCCPSYCVSSCCRPQCC---QTTCCRT-TCCRPSCCVSRCYR 157
>AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein.
Length = 714
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 37 KADLIPDEND--PXNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNI 210
K+D IP N N N + D+D + TTP+++ N+ K E LNI
Sbjct: 199 KSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGCENLNI 258
Query: 211 ESDIIKTEQTDAP 249
D I ++T P
Sbjct: 259 VQDKIMQQETSVP 271
>AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated protein
protein.
Length = 106
Score = 31.1 bits (67), Expect = 3.5
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -1
Query: 532 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 392
CCQ CC V + R +CC +TT C T T R C S C R
Sbjct: 55 CCQPTCCCPSYCVSSCCRPQCC---QTTRCRT-TCCRPSCCVSRCYR 97
>AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 31.1 bits (67), Expect = 3.5
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -1
Query: 610 CTFSICLYRPAQVSIRSVKFLKFCLYCCQIRACCVPATV*TARRQKCCAKPRTTVCLTC- 434
CT S C RP+ + + YC I +CC PA+ Q C +P + V L C
Sbjct: 147 CTTSCC--RPSSSVSLLCRPVCRSTYCVPIPSCCAPAST----CQPSCCRPASCVSLLCR 200
Query: 433 -TLARILS 413
T +R+ S
Sbjct: 201 PTCSRLSS 208
>BC130562-1|AAI30563.1| 195|Homo sapiens keratin associated protein
4-14 protein.
Length = 195
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/87 (25%), Positives = 29/87 (33%)
Frame = -1
Query: 544 FCLYCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVF 365
+C C + +CC P + Q C +PR C + R C S C +
Sbjct: 39 YCRPSCCVSSCCRPQCCQSVCCQPTCCRPR---CCISSCCRPSCCVSSCCKPQCCQSMCC 95
Query: 364 SNICNTRRILI*VLSRPPCTRPRSHRP 284
C R I RP C RP
Sbjct: 96 QPTCCRPRCCISSCCRPSCCVSSCCRP 122
>BC126131-1|AAI26132.1| 195|Homo sapiens keratin associated protein
4-14 protein.
Length = 195
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/87 (25%), Positives = 29/87 (33%)
Frame = -1
Query: 544 FCLYCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVF 365
+C C + +CC P + Q C +PR C + R C S C +
Sbjct: 39 YCRPSCCVSSCCRPQCCQSVCCQPTCCRPR---CCISSCCRPSCCVSSCCKPQCCQSMCC 95
Query: 364 SNICNTRRILI*VLSRPPCTRPRSHRP 284
C R I RP C RP
Sbjct: 96 QPTCCRPRCCISSCCRPSCCVSSCCRP 122
>BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 535 YCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNI 356
+ C C P T T ++ C K + C L I SC C TL + +
Sbjct: 784 HSCHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRL 840
Query: 355 CNTRRILI*VLSRPPCTRPRS 293
C+ L+ + PCT PR+
Sbjct: 841 CHKGECLVDEPCKQPCTTPRA 861
>AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 535 YCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNI 356
+ C C P T T ++ C K + C L I SC C TL + +
Sbjct: 784 HSCHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRL 840
Query: 355 CNTRRILI*VLSRPPCTRPRS 293
C+ L+ + PCT PR+
Sbjct: 841 CHKGECLVDEPCKQPCTTPRA 861
>AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 535 YCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNI 356
+ C C P T T ++ C K + C L I SC C TL + +
Sbjct: 784 HSCHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRL 840
Query: 355 CNTRRILI*VLSRPPCTRPRS 293
C+ L+ + PCT PR+
Sbjct: 841 CHKGECLVDEPCKQPCTTPRA 861
>AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 535 YCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNI 356
+ C C P T T ++ C K + C L I SC C TL + +
Sbjct: 784 HSCHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRL 840
Query: 355 CNTRRILI*VLSRPPCTRPRS 293
C+ L+ + PCT PR+
Sbjct: 841 CHKGECLVDEPCKQPCTTPRA 861
>AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 535 YCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNI 356
+ C C P T T ++ C K + C L I SC C TL + +
Sbjct: 784 HSCHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRL 840
Query: 355 CNTRRILI*VLSRPPCTRPRS 293
C+ L+ + PCT PR+
Sbjct: 841 CHKGECLVDEPCKQPCTTPRA 861
>AJ406945-1|CAC27584.1| 193|Homo sapiens keratin associated protein
4.15 protein.
Length = 193
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -1
Query: 532 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 392
CCQ CC P T R CC T C T R C S C R
Sbjct: 38 CCQ-SVCCQP----TCCRPSCCPSCCQTTCCRTTCCRPSCCVSSCCR 79
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 541 CLYCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 392
C C I +CC P+ ++ + CC +P CL R+ SC + C R
Sbjct: 128 CRPSCCISSCCRPSCCESSCCRPCCCRP--CCCLRPVCGRV-SCHTTCYR 174
>AJ406944-1|CAC27583.1| 195|Homo sapiens keratin associated protein
4.14 protein.
Length = 195
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/87 (25%), Positives = 29/87 (33%)
Frame = -1
Query: 544 FCLYCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVF 365
+C C + +CC P + Q C +PR C + R C S C +
Sbjct: 39 YCRPSCCVSSCCRPQCCQSVCCQPTCCRPR---CCISSCCRPSCCVSSCCKPQCCQSMCC 95
Query: 364 SNICNTRRILI*VLSRPPCTRPRSHRP 284
C R I RP C RP
Sbjct: 96 QPTCCRPRCCISSCCRPSCCVSSCCRP 122
>AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated protein
4.5 protein.
Length = 186
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = -1
Query: 541 CLYCCQIRACCVPATV*TARRQKCCAKP---RTTVCLTCTLARILSCWSLC 398
C C I +CC P ++ + CC +P +TT C T C S C
Sbjct: 56 CHPSCCISSCCRPYCCESSCCRPCCCRPSCCQTTCCRTTCCRTTCCCPSCC 106
>AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription factor
NFX2 protein.
Length = 1024
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 535 YCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNI 356
+ C C P T T ++ C K + C L I SC C TL + +
Sbjct: 784 HSCHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRL 840
Query: 355 CNTRRILI*VLSRPPCTRPRS 293
C+ L+ + PCT PR+
Sbjct: 841 CHKGECLVDEPCKQPCTTPRA 861
>BC126423-1|AAI26424.1| 210|Homo sapiens keratin associated protein
4-7 protein.
Length = 210
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 541 CLYCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 392
C C I +CC P+ ++ + CC +P CL R+ SC + C R
Sbjct: 145 CRPSCCISSCCRPSCCESSCCRPCCCRP--CCCLRPVCGRV-SCHTTCYR 191
>BC126421-1|AAI26422.1| 210|Homo sapiens keratin associated protein
4-7 protein.
Length = 210
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 541 CLYCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 392
C C I +CC P+ ++ + CC +P CL R+ SC + C R
Sbjct: 145 CRPSCCISSCCRPSCCESSCCRPCCCRP--CCCLRPVCGRV-SCHTTCYR 191
>BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein.
Length = 678
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 124 NFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDAPATSGD 264
NF +P P + D ++ PF TLNI I E TD SGD
Sbjct: 548 NFMESVPEPRPSEWDKRLSTHSPFRTLNINGQIPTGEGTD--DNSGD 592
>BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 85 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 258
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 259 GD 264
D
Sbjct: 775 PD 776
>AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 85 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 258
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 259 GD 264
D
Sbjct: 775 PD 776
>AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 85 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 258
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 259 GD 264
D
Sbjct: 775 PD 776
>AJ406939-1|CAC27578.1| 210|Homo sapiens keratin associated protein
4.7 protein.
Length = 210
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 541 CLYCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 392
C C I +CC P+ ++ + CC +P CL R+ SC + C R
Sbjct: 145 CRPSCCISSCCRPSCCESSCCRPCCCRP--CCCLRPVCGRV-SCHTTCYR 191
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 29.9 bits (64), Expect = 8.0
Identities = 25/104 (24%), Positives = 45/104 (43%)
Frame = -3
Query: 338 FDLSFKPSTVYSSSFASTTFRLLLSSPLVAGASVCSVLIISDSIFKVSKGLMAFIKSSFC 159
F L P+T S +ST + SSPL + + S L + + S + ++
Sbjct: 7974 FSLMSSPATTSPSPVSSTLPESISSSPLPVTSLLTSGLAKTTDMLHKSSEPVTNSPANLS 8033
Query: 158 SGVVNGKSIEKLSSSVHSSGTLFRRNVTXLGSFSSGIKSALILL 27
S V + ++++ + R VT +G+ SSG +S +L
Sbjct: 8034 STSVEILATSEVTTDTEKTHPSSNRTVTDVGTSSSGHESTSFVL 8077
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,330,402
Number of Sequences: 237096
Number of extensions: 1618698
Number of successful extensions: 8059
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8036
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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