Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4o15
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr... 35 0.27
BC150196-1|AAI50197.1| 726|Homo sapiens Unknown (protein for IM... 35 0.27
BC139918-1|AAI39919.1| 726|Homo sapiens MAP1B protein protein. 35 0.27
BC094834-1|AAH94834.1| 727|Homo sapiens MAP1B protein protein. 35 0.27
BC141853-1|AAI41854.1| 571|Homo sapiens MAP1B protein protein. 35 0.35
BC051863-1|AAH51863.1| 835|Homo sapiens family with sequence si... 31 3.3
BC017240-1|AAH17240.1| 693|Homo sapiens MAP1B protein protein. 31 3.3
AL645992-1|CAH70756.1| 835|Homo sapiens novel protein protein. 31 3.3
AK022978-1|BAB14342.1| 835|Homo sapiens protein ( Homo sapiens ... 31 3.3
BC108733-1|AAI08734.1| 685|Homo sapiens MAP1B protein protein. 30 10.0
>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated
protein 1B protein.
Length = 2468
Score = 35.1 bits (77), Expect = 0.27
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Frame = +2
Query: 344 PKLQSKEEASSRIDVQVKTEPLAXXXXXXXXXXXEPCDMDCN------EDLKPPDIKDVK 505
PK++SKE+ + D VKTE EP + D+KP K+
Sbjct: 578 PKVESKEKVMVKKDKPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKT 637
Query: 506 VASDY----EGTKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKM-LQRKEKSKP 667
V + E K+ K K +VA K D K+ + K + + + VK ++++EK +P
Sbjct: 638 VKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEP 696
>BC150196-1|AAI50197.1| 726|Homo sapiens Unknown (protein for
IMAGE:40148774) protein.
Length = 726
Score = 35.1 bits (77), Expect = 0.27
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Frame = +2
Query: 344 PKLQSKEEASSRIDVQVKTEPLAXXXXXXXXXXXEPCDMDCN------EDLKPPDIKDVK 505
PK++SKE+ + D VKTE EP + D+KP K+
Sbjct: 578 PKVESKEKVMVKKDKPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKT 637
Query: 506 VASDY----EGTKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKM-LQRKEKSKP 667
V + E K+ K K +VA K D K+ + K + + + VK ++++EK +P
Sbjct: 638 VKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEP 696
>BC139918-1|AAI39919.1| 726|Homo sapiens MAP1B protein protein.
Length = 726
Score = 35.1 bits (77), Expect = 0.27
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Frame = +2
Query: 344 PKLQSKEEASSRIDVQVKTEPLAXXXXXXXXXXXEPCDMDCN------EDLKPPDIKDVK 505
PK++SKE+ + D VKTE EP + D+KP K+
Sbjct: 578 PKVESKEKVMVKKDKPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKT 637
Query: 506 VASDY----EGTKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKM-LQRKEKSKP 667
V + E K+ K K +VA K D K+ + K + + + VK ++++EK +P
Sbjct: 638 VKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEP 696
>BC094834-1|AAH94834.1| 727|Homo sapiens MAP1B protein protein.
Length = 727
Score = 35.1 bits (77), Expect = 0.27
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Frame = +2
Query: 344 PKLQSKEEASSRIDVQVKTEPLAXXXXXXXXXXXEPCDMDCN------EDLKPPDIKDVK 505
PK++SKE+ + D VKTE EP + D+KP K+
Sbjct: 578 PKVESKEKVMVKKDKPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKT 637
Query: 506 VASDY----EGTKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKM-LQRKEKSKP 667
V + E K+ K K +VA K D K+ + K + + + VK ++++EK +P
Sbjct: 638 VKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEP 696
>BC141853-1|AAI41854.1| 571|Homo sapiens MAP1B protein protein.
Length = 571
Score = 34.7 bits (76), Expect = 0.35
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Frame = +2
Query: 344 PKLQSKEEASSRIDVQVKTEPLAXXXXXXXXXXXEPCDMDCN------EDLKPPDIKDVK 505
PK++SKE+ + D VKTE EP + D+KP K+
Sbjct: 452 PKVESKEKVMVKKDKPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKT 511
Query: 506 VASDY----EGTKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKMLQRKEKSK 664
V + E K+ K K +VA K D K+ + K + + + VK +KE+ K
Sbjct: 512 VKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKK 568
>BC051863-1|AAH51863.1| 835|Homo sapiens family with sequence
similarity 35, member A protein.
Length = 835
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 188 YSEMLMDCFGLLLSN-LDGDNKESCICATCVVRLRDAYAFRQQVLQCEEAFLNPKLQSKE 364
Y E+ C GL SN +D E+ + +++ F + + AFL K +
Sbjct: 203 YHEIQNQCLGLFSSNAVDKSRSEAAVRKVSDLKISTDTEFLSIITSSQVAFLAQKKDKRR 262
Query: 365 EASSRIDVQVKTEPLA 412
++ +V ++TEP A
Sbjct: 263 SPVNKGNVNMETEPKA 278
>BC017240-1|AAH17240.1| 693|Homo sapiens MAP1B protein protein.
Length = 693
Score = 31.5 bits (68), Expect = 3.3
Identities = 28/107 (26%), Positives = 46/107 (42%)
Frame = +2
Query: 344 PKLQSKEEASSRIDVQVKTEPLAXXXXXXXXXXXEPCDMDCNEDLKPPDIKDVKVASDYE 523
PK++SKE+ + D VKTE EP + ++ DVK + E
Sbjct: 578 PKVESKEKVMVKKDKPVKTETKPSVTEKEVPSKEEPSPV--KAEVAEKQATDVKPKAAKE 635
Query: 524 GTKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKMLQRKEKSK 664
K +K+ K K K++ + KK K + P+K ++ +K K
Sbjct: 636 --KTVKKETKVKPEDKKEEKEKPKKEVAKKEDK-TPIKKEEKPKKKK 679
>AL645992-1|CAH70756.1| 835|Homo sapiens novel protein protein.
Length = 835
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 188 YSEMLMDCFGLLLSN-LDGDNKESCICATCVVRLRDAYAFRQQVLQCEEAFLNPKLQSKE 364
Y E+ C GL SN +D E+ + +++ F + + AFL K +
Sbjct: 203 YHEIQNQCLGLFSSNAVDKSRSEAAVRKVSDLKISTDTEFLSIITSSQVAFLAQKKDKRR 262
Query: 365 EASSRIDVQVKTEPLA 412
++ +V ++TEP A
Sbjct: 263 SPVNKGNVNMETEPKA 278
>AK022978-1|BAB14342.1| 835|Homo sapiens protein ( Homo sapiens
cDNA FLJ12916 fis, clone NT2RP2004551. ).
Length = 835
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 188 YSEMLMDCFGLLLSN-LDGDNKESCICATCVVRLRDAYAFRQQVLQCEEAFLNPKLQSKE 364
Y E+ C GL SN +D E+ + +++ F + + AFL K +
Sbjct: 203 YHEIQNQCLGLFSSNAVDKSRSEAAVRKVSDLKISTDTEFLSIITSSQVAFLAQKKDKRR 262
Query: 365 EASSRIDVQVKTEPLA 412
++ +V ++TEP A
Sbjct: 263 SPVNKGNVNMETEPKA 278
>BC108733-1|AAI08734.1| 685|Homo sapiens MAP1B protein protein.
Length = 685
Score = 29.9 bits (64), Expect = 10.0
Identities = 27/107 (25%), Positives = 46/107 (42%)
Frame = +2
Query: 344 PKLQSKEEASSRIDVQVKTEPLAXXXXXXXXXXXEPCDMDCNEDLKPPDIKDVKVASDYE 523
PK++SKE+ + D VKTE EP + ++ DVK + E
Sbjct: 578 PKVESKEKVMVKKDKPVKTETKPSVTEKEVPSKEEPSPV--KAEVAEKQATDVKPKAAKE 635
Query: 524 GTKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKMLQRKEKSK 664
K +K+ K K K++ + KK K + P+K ++ +K +
Sbjct: 636 --KTVKKETKVKPEDKKEEKEKPKKEVAKKEDK-TPIKKEEKPKKEE 679
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,281,253
Number of Sequences: 237096
Number of extensions: 2050897
Number of successful extensions: 5769
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5767
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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