Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4o14
         (723 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PV49 Cluster: ENSANGP00000008649; n=1; Anopheles gamb...    34   4.1  
UniRef50_A0CAL5 Cluster: Chromosome undetermined scaffold_161, w...    33   7.1  

>UniRef50_Q7PV49 Cluster: ENSANGP00000008649; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000008649 - Anopheles gambiae
           str. PEST
          Length = 508

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 158 IKPNTHPHSAYHVARVQHIRTLRLCSVCEKARGMTSHCIMKSLPISLSRGLTYECE 325
           ++   H +   HV  V   R ++ C +C  A+G TS+   KS  +    G TYEC+
Sbjct: 209 VRMANHANLYRHVQAVHLKRVVKSCEIC--AKGFTSNASYKSHMVRHGIGETYECK 262



 Score = 33.9 bits (74), Expect = 4.1
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 158 IKPNTHPHSAYHVARVQHIRTLRLCSVCEKARGMTSHCIMKSLPISLSRGLTYECE 325
           ++   H +   HV  V   R ++ C +C  A+G TS+   KS  +    G TYEC+
Sbjct: 351 VRMANHANLYRHVQAVHLKRVVKSCEIC--AKGFTSNASYKSHMVRHGIGETYECK 404


>UniRef50_A0CAL5 Cluster: Chromosome undetermined scaffold_161, whole
            genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_161, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1112

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 37   NLFCII*TLCVKIRNYFLSYCIAFIACFERGDRIK-KFRNEN 159
            N   II  +C+KI NY +S+ +  I   E GD++K +F N+N
Sbjct: 921  NKIQIISQICIKIENYSISFKVLNILRHELGDKMKLQFYNKN 962


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,908,962
Number of Sequences: 1657284
Number of extensions: 9881285
Number of successful extensions: 19476
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19471
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)