Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4o08
         (157 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   2.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    20   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   2.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    19   3.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    19   3.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          19   4.5  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    19   4.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    19   5.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    19   5.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    19   5.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 149 LKHHL*SDVHGKFFLPKKCIVTC 81
           L++HL +    K F   KC  TC
Sbjct: 246 LEYHLRNHAGSKPFQCNKCDYTC 268


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 149 LKHHL*SDVHGKFFLPKKCIVTC 81
           L++HL +    K F   KC  TC
Sbjct: 4   LEYHLRNHAGSKPFQCNKCDYTC 26


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 98   KCIVTCWGSG*IKNSTEI*ICNLKHLRSTLKF 3
            K I+    SG I  +  I IC+L H +  +KF
Sbjct: 1155 KAIIIMILSGCIIFTEGIWICSLIHRKKIVKF 1186


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 491

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 51 GRIFDLSRTP 80
          G +FD+ RTP
Sbjct: 43 GNLFDIMRTP 52


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
          monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 51 GRIFDLSRTP 80
          G +FD+ RTP
Sbjct: 43 GNLFDIMRTP 52


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 60  FDLSRTPARNDTFFGQKKLSMY 125
           F+++     N+ + G+KKLS +
Sbjct: 9   FEITDYDLNNEFYRGRKKLSKH 30



 Score = 19.0 bits (37), Expect = 4.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 103 PKNVSLRAGVRDKSKILPKYK 41
           P+  S    VR  SKI P YK
Sbjct: 737 PRVESFAETVRTVSKIPPLYK 757


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 70  PEPQHVTIHFLGKKNFPCTS 129
           P P+ V +  L +   PC S
Sbjct: 114 PSPRRVAVPVLVRDGKPCLS 133


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 106 CPKNVSLRAGVRDKSKILPKYKF 38
           C KN   +     KSK  P Y +
Sbjct: 66  CSKNSPEKESEEKKSKEKPPYSY 88


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -1

Query: 145 NTTSRATYMESFFCPKNVSLRAGVRDKSKILPKYK 41
           N+T R   M S++    V +       +  +PKY+
Sbjct: 118 NSTLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYE 152


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -1

Query: 145 NTTSRATYMESFFCPKNVSLRAGVRDKSKILPKYK 41
           N+T R   M S++    V +       +  +PKY+
Sbjct: 118 NSTLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYE 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,144
Number of Sequences: 336
Number of extensions: 543
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 32
effective length of database: 111,833
effective search space used:  2124827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)