Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4n22
(730 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 233 2e-60
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 222 6e-57
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 205 7e-52
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 204 1e-51
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 184 1e-45
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 122 1e-26
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 109 5e-23
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 105 8e-22
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 104 2e-21
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 101 2e-20
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 100 3e-20
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 100 4e-20
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 100 4e-20
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 99 6e-20
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 99 6e-20
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 99 6e-20
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 100 7e-20
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 100 7e-20
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 99 1e-19
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 98 2e-19
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 98 2e-19
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 98 2e-19
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 98 2e-19
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 98 2e-19
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 97 3e-19
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 97 3e-19
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 97 4e-19
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 97 4e-19
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 97 5e-19
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 97 5e-19
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 96 9e-19
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 96 9e-19
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 96 9e-19
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 95 1e-18
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 95 1e-18
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 95 1e-18
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 95 1e-18
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 95 2e-18
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 95 2e-18
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 95 2e-18
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 94 3e-18
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 94 3e-18
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 94 4e-18
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 93 5e-18
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 93 5e-18
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 93 8e-18
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 93 8e-18
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 93 8e-18
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 92 1e-17
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 92 1e-17
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 92 1e-17
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 92 1e-17
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 92 1e-17
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 91 2e-17
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 91 2e-17
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 91 2e-17
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 91 2e-17
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 91 2e-17
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 91 3e-17
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 91 3e-17
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 91 3e-17
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 91 3e-17
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 91 3e-17
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 91 3e-17
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 91 3e-17
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 90 4e-17
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 90 4e-17
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 90 4e-17
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 90 4e-17
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 90 4e-17
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 90 6e-17
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 90 6e-17
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 90 6e-17
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 90 6e-17
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 89 8e-17
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 89 8e-17
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 89 8e-17
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 89 8e-17
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 89 1e-16
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 89 1e-16
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 89 1e-16
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 89 1e-16
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 89 1e-16
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 89 1e-16
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 89 1e-16
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 89 1e-16
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 89 1e-16
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 89 1e-16
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 89 1e-16
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 88 2e-16
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 88 2e-16
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 88 2e-16
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 88 2e-16
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 88 2e-16
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 88 2e-16
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 88 2e-16
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 88 2e-16
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 87 3e-16
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 87 3e-16
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 3e-16
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 87 3e-16
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 87 4e-16
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 87 4e-16
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 87 4e-16
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 87 4e-16
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 87 4e-16
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 87 4e-16
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 87 4e-16
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 87 5e-16
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 5e-16
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 87 5e-16
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 87 5e-16
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 87 5e-16
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 87 5e-16
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 86 7e-16
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 86 7e-16
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 86 7e-16
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 86 1e-15
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 86 1e-15
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 86 1e-15
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 86 1e-15
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 85 1e-15
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 85 1e-15
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 85 1e-15
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 85 1e-15
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 85 1e-15
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 85 2e-15
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 85 2e-15
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 85 2e-15
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 85 2e-15
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 85 2e-15
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 85 2e-15
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 85 2e-15
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 85 2e-15
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 84 3e-15
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 84 3e-15
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 84 4e-15
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 84 4e-15
UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia intes... 84 4e-15
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 84 4e-15
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 83 5e-15
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 83 5e-15
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 83 5e-15
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 83 5e-15
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 83 5e-15
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 83 5e-15
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 83 7e-15
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 83 7e-15
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 83 7e-15
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 83 7e-15
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 83 9e-15
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 83 9e-15
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 83 9e-15
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 83 9e-15
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 83 9e-15
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 83 9e-15
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 83 9e-15
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 83 9e-15
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 83 9e-15
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 82 1e-14
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 82 1e-14
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 82 1e-14
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 1e-14
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 82 1e-14
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 82 1e-14
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 82 1e-14
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 82 2e-14
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 82 2e-14
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 82 2e-14
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 82 2e-14
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 82 2e-14
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 81 2e-14
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 81 3e-14
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 81 3e-14
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 81 3e-14
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 81 3e-14
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 81 3e-14
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 81 3e-14
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 81 3e-14
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 81 3e-14
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 81 4e-14
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 81 4e-14
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 81 4e-14
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 81 4e-14
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 81 4e-14
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 80 5e-14
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 80 5e-14
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 80 5e-14
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 80 5e-14
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 80 5e-14
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 80 6e-14
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 80 6e-14
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 80 6e-14
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 80 6e-14
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 80 6e-14
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 80 6e-14
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 80 6e-14
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 80 6e-14
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 80 6e-14
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 80 6e-14
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 80 6e-14
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 80 6e-14
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 80 6e-14
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 80 6e-14
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 80 6e-14
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 80 6e-14
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 79 8e-14
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 79 8e-14
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 79 8e-14
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 79 8e-14
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 79 8e-14
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 79 8e-14
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 79 8e-14
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 79 8e-14
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 79 8e-14
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 79 1e-13
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 79 1e-13
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 79 1e-13
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 79 1e-13
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 79 1e-13
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 79 1e-13
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 79 1e-13
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 79 1e-13
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 79 1e-13
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 1e-13
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 79 1e-13
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 79 1e-13
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 1e-13
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 78 2e-13
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 78 2e-13
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 78 2e-13
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 78 2e-13
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 78 2e-13
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 78 2e-13
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 78 2e-13
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 78 2e-13
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 78 3e-13
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 78 3e-13
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 78 3e-13
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 77 3e-13
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 77 3e-13
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 77 3e-13
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 77 3e-13
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 77 3e-13
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 77 3e-13
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 77 3e-13
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 77 4e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 77 4e-13
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 77 4e-13
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 77 4e-13
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 77 4e-13
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 77 4e-13
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 77 6e-13
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 77 6e-13
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 77 6e-13
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 77 6e-13
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 77 6e-13
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 77 6e-13
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 77 6e-13
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 77 6e-13
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 77 6e-13
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 77 6e-13
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 76 8e-13
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 76 8e-13
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 76 8e-13
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 76 8e-13
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 76 8e-13
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 76 8e-13
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 76 8e-13
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 76 1e-12
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 76 1e-12
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 76 1e-12
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 76 1e-12
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 76 1e-12
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 76 1e-12
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 75 1e-12
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 75 1e-12
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 75 1e-12
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 75 1e-12
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 75 1e-12
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 75 1e-12
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 75 1e-12
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 75 1e-12
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 75 1e-12
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 2e-12
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 75 2e-12
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 2e-12
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 75 2e-12
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 75 2e-12
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 75 2e-12
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 75 2e-12
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 75 2e-12
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 75 2e-12
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 75 2e-12
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 2e-12
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 2e-12
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 75 2e-12
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 75 2e-12
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 75 2e-12
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 75 2e-12
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 75 2e-12
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 2e-12
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 75 2e-12
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 74 3e-12
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 74 3e-12
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 74 3e-12
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 74 3e-12
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 74 3e-12
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 74 3e-12
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 74 3e-12
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 74 3e-12
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 74 4e-12
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 74 4e-12
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 4e-12
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 74 4e-12
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 74 4e-12
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 74 4e-12
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 74 4e-12
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 74 4e-12
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 74 4e-12
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 74 4e-12
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 74 4e-12
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 5e-12
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 73 5e-12
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 73 5e-12
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 73 5e-12
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 73 5e-12
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 73 5e-12
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 73 5e-12
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 73 5e-12
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 73 5e-12
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 73 7e-12
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 73 7e-12
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 73 1e-11
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 73 1e-11
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 73 1e-11
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 73 1e-11
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 73 1e-11
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 73 1e-11
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 73 1e-11
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 73 1e-11
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 73 1e-11
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 73 1e-11
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 73 1e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 72 1e-11
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 72 1e-11
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 72 1e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 72 1e-11
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 72 1e-11
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 72 1e-11
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 72 1e-11
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 72 1e-11
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 72 1e-11
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 72 1e-11
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 72 1e-11
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 72 1e-11
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 72 1e-11
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 72 2e-11
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 72 2e-11
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 72 2e-11
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 72 2e-11
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 72 2e-11
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 71 2e-11
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 71 2e-11
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 71 2e-11
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q1E370 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 71 2e-11
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 71 3e-11
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 71 3e-11
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 71 3e-11
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 71 3e-11
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 71 3e-11
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 71 3e-11
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 71 3e-11
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 71 3e-11
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 71 4e-11
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 71 4e-11
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 71 4e-11
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 71 4e-11
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 71 4e-11
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 71 4e-11
UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1; Y... 71 4e-11
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 71 4e-11
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 70 5e-11
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 70 5e-11
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 70 5e-11
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 70 5e-11
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 70 5e-11
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 70 5e-11
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 70 5e-11
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 70 5e-11
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 70 7e-11
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 70 7e-11
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 7e-11
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 70 7e-11
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 70 7e-11
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 70 7e-11
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 70 7e-11
UniRef50_A7AR78 Cluster: DEAD box RNA helicase, putative; n=1; B... 70 7e-11
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 7e-11
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 9e-11
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 69 9e-11
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 69 9e-11
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 69 9e-11
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 69 9e-11
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 69 9e-11
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 69 9e-11
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 69 9e-11
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 69 1e-10
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 69 1e-10
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 69 1e-10
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 69 1e-10
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 69 1e-10
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 69 1e-10
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 69 1e-10
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 1e-10
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 69 1e-10
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 69 1e-10
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 69 1e-10
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 69 1e-10
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 69 1e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 69 1e-10
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 69 1e-10
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 69 1e-10
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 69 2e-10
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 69 2e-10
UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-... 69 2e-10
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 69 2e-10
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 69 2e-10
UniRef50_Q4QAV6 Cluster: ATP-dependent RNA helicase, putative; n... 69 2e-10
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 69 2e-10
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 69 2e-10
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 69 2e-10
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 69 2e-10
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 68 2e-10
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 68 2e-10
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 68 2e-10
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 68 2e-10
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 68 2e-10
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 68 2e-10
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 68 2e-10
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 68 2e-10
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 68 2e-10
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 68 3e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 68 3e-10
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 68 3e-10
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 68 3e-10
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 68 3e-10
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 68 3e-10
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 68 3e-10
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 68 3e-10
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 68 3e-10
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 67 4e-10
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 67 4e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 67 4e-10
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 67 4e-10
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 67 4e-10
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 67 4e-10
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 67 4e-10
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 67 4e-10
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 67 4e-10
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 67 5e-10
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 233 bits (571), Expect = 2e-60
Identities = 107/141 (75%), Positives = 126/141 (89%), Gaps = 1/141 (0%)
Frame = +1
Query: 310 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 489
WK LK+PPKD R++TSDVT T+GNEFE++CLKRELLMGIFE GWEKPSPIQE SIPIAL
Sbjct: 65 WKRNLKLPPKDNRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIAL 124
Query: 490 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 669
SG+D+LARAKNGTGK+GAY IP+LE++D KKD IQAL++VPTRELALQ SQI I++AKH
Sbjct: 125 SGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHL 184
Query: 670 -DIRVMVTTGGTNLRDDIMRI 729
++VM TTGGTNLRDDIMR+
Sbjct: 185 GGVKVMATTGGTNLRDDIMRL 205
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 222 bits (543), Expect = 6e-57
Identities = 110/172 (63%), Positives = 138/172 (80%), Gaps = 4/172 (2%)
Frame = +1
Query: 226 NRISSSNHVGNSISQTKGEVDKSI---DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEE 396
N++ ++N + N Q + +I DD WK+ LK+PPKD RIKT DVT T+GNEFE+
Sbjct: 30 NQLKNTNTINNGTPQQAQSMAATIRPGDD--WKT-LKLPPKDLRIKTLDVTSTKGNEFED 86
Query: 397 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 576
+CLKRELL+GIFE GWE PS IQE SIPIALSG+D+LARAKNGTGK+GAY IP+LE++D
Sbjct: 87 YCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL 145
Query: 577 KKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRI 729
KKD IQA+++VPTRELALQ SQICI+++KH +VM TTGGTNLRDD+MR+
Sbjct: 146 KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRL 197
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 205 bits (501), Expect = 7e-52
Identities = 97/144 (67%), Positives = 117/144 (81%), Gaps = 3/144 (2%)
Frame = +1
Query: 226 NRISSSNHVGNSISQTKGEVDKSI---DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEE 396
N++ ++N + N Q + +I DD WK LK+PPKD RIKTSDVT T+GNEFE+
Sbjct: 43 NQLKNTNTINNGTQQQAQSMTTTIKPGDD--WKKTLKLPPKDLRIKTSDVTSTKGNEFED 100
Query: 397 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 576
+CLKRELLMGIFE GWEKPSPIQE SIPIALSG+D+LARAKNGTGK+GAY IP+LE++D
Sbjct: 101 YCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL 160
Query: 577 KKDTIQALIVVPTRELALQTSQIC 648
KKD IQA+++VPTRELALQ SQIC
Sbjct: 161 KKDNIQAMVIVPTRELALQVSQIC 184
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 204 bits (499), Expect = 1e-51
Identities = 97/143 (67%), Positives = 116/143 (81%)
Frame = +1
Query: 301 DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIP 480
D WK+ L IP KD R +T DV +T+GN FE+F LKRELLMGIFE G+EKPSPIQE +IP
Sbjct: 19 DRDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIP 78
Query: 481 IALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 660
+A++G+D+LARAKNGTGKT A+ IP LE+V PK + IQALI+VPTRELALQTSQ+ L
Sbjct: 79 VAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLG 138
Query: 661 KHTDIRVMVTTGGTNLRDDIMRI 729
KH I MVTTGGTNLRDDI+R+
Sbjct: 139 KHCGISCMVTTGGTNLRDDILRL 161
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 184 bits (449), Expect = 1e-45
Identities = 86/141 (60%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
Frame = +1
Query: 310 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 489
WK L PPKD R +T DVT T+G+ FE+F L+RELLMGI+ G+E+PSPIQE +IP+AL
Sbjct: 12 WKQGLAAPPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMAL 71
Query: 490 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH- 666
+G+D+LARAKNGTGKT ++ IP L +++ IQALI+VPTRELALQTSQ+C L H
Sbjct: 72 TGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHI 131
Query: 667 TDIRVMVTTGGTNLRDDIMRI 729
+++VM+TTGGT LRDDI+R+
Sbjct: 132 PNLQVMITTGGTTLRDDILRL 152
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 122 bits (293), Expect = 1e-26
Identities = 61/130 (46%), Positives = 95/130 (73%), Gaps = 3/130 (2%)
Frame = +1
Query: 337 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 516
+D RI T DV + G F LK+ELLMG+ ++G+++ +P+QE +IP L+ +DV+ARA
Sbjct: 7 RDTRITTDDVKGS-GVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARA 65
Query: 517 KNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDI--RVMV 687
KNGTGKTG++ IP+L+ V+P KD IQAL+++ TRELA+QT+++ L+K+ D+ R+M
Sbjct: 66 KNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMC 125
Query: 688 TTGGTNLRDD 717
GG ++ +D
Sbjct: 126 AIGGVSIAED 135
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 109 bits (263), Expect = 5e-23
Identities = 54/129 (41%), Positives = 85/129 (65%)
Frame = +1
Query: 343 RRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKN 522
+R+ + DV +T G +E L LL I + G++ PSP+Q ASIP L GK++L R+KN
Sbjct: 95 KRLLSEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKN 154
Query: 523 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 702
GTGKT +Y +P+L ++ + +IQ +I+VP RELALQ S+ +++ T + GGT
Sbjct: 155 GTGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGT 214
Query: 703 NLRDDIMRI 729
+++DDI+R+
Sbjct: 215 SMQDDIIRV 223
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 105 bits (253), Expect = 8e-22
Identities = 54/121 (44%), Positives = 81/121 (66%)
Frame = +1
Query: 349 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 528
+K+ DT+G F+ F LK +L GI E G+ PSP+Q SIPI L GKD++A+A+ GT
Sbjct: 36 LKSKHKQDTQG--FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGT 93
Query: 529 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
GKT A+ IP+L ++ KD I+ALI+ PTRELA+Q S+ ++L + I+ + GG ++
Sbjct: 94 GKTAAFAIPILNTLNRNKD-IEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSI 152
Query: 709 R 711
+
Sbjct: 153 K 153
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 104 bits (250), Expect = 2e-21
Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F+E L R +L G+ G+ KP+PIQ +IPI+L GKDV+ A G+GKT A+ +P+L
Sbjct: 293 SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPIL 352
Query: 562 EQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
E++ PKK T + +I+ PTRELA+Q + ++LA HTDI+ + GG +L+
Sbjct: 353 ERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLK 405
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 101 bits (242), Expect = 2e-20
Identities = 49/113 (43%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F+ L R +L G+ G+ KP+PIQ +IPIAL GKDV+ A G+GKT A+ +P+L
Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 335
Query: 562 EQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
E++ PKK T + +++ PTRELA+Q + +LA HTDI+ + GG +L+
Sbjct: 336 ERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLK 388
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 100 bits (240), Expect = 3e-20
Identities = 43/111 (38%), Positives = 72/111 (64%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L LL + G+E+ +PIQ +IP AL GKD++ +A+ GTGKT A+ +P+L++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
VD K+++Q +++ PTRELA+Q + ++ KH +R++ GG ++ I
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQI 114
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 100 bits (239), Expect = 4e-20
Identities = 47/100 (47%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Frame = +1
Query: 433 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVP 612
E G + +PIQE +IP+ LSGKD++ +AK GTGKT A+ +P+LE++DP+ +QALIV P
Sbjct: 22 ENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAP 81
Query: 613 TRELALQ-TSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
TRELALQ T++I L + DI V+ GG ++ + ++
Sbjct: 82 TRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 100 bits (239), Expect = 4e-20
Identities = 48/111 (43%), Positives = 74/111 (66%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FEEF L+ EL+ I G+ +P+ +Q +IPIAL+G D++ R+K G+GKT AY IP++
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
K+ I+ALI++PTRELA+Q +++ L K + IR +V GG ++ I
Sbjct: 64 T-AKEKGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQI 113
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 99 bits (238), Expect = 6e-20
Identities = 48/103 (46%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F++ LK +LL+G+ + G+E PS IQE IP+A++ KD+LAR+KNGTGKT ++ IP+L+
Sbjct: 16 KFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQ 75
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVT 690
+ + I+++I+VPTRELALQ S + +L+K+ +I + VT
Sbjct: 76 NIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQVT 118
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 99 bits (238), Expect = 6e-20
Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 4/161 (2%)
Frame = +1
Query: 244 NHVGNSISQTKGEVDKSID-DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELL 420
+H + S+ + + +D + K K P+++ + + T++ F+EF L R +L
Sbjct: 744 HHPDDEASEPDSDAESEVDAEEEAKRKAFFAPEEKTDEDA-ATNSAKRSFQEFNLSRPIL 802
Query: 421 MGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTI 591
G+ + P+PIQ+ +IP+AL GKD++ A G+GKT A+ +P+LE++ P+K T
Sbjct: 803 RGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTS 862
Query: 592 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
+ I++PTRELA+Q + +LA +TDI GG +LR+
Sbjct: 863 RVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLRE 903
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 99 bits (238), Expect = 6e-20
Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F EF + ELL I + G+E+P+PIQ +IP L GKDV +A+ GTGKT A+ IP++E+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGG 699
+DP +QAL++ PTRELA+QT++ L K+ + V+ GG
Sbjct: 67 LDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGG 111
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 99.5 bits (237), Expect = 7e-20
Identities = 43/110 (39%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ L ++ L+G+ +KG+ P+PIQ +IP L G D++A A+ G+GKT AY +P++ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 568 VDP-KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
++ + +++LI+ PTRELALQT ++ EL K T+++ + GG+ L D
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSD 124
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 99.5 bits (237), Expect = 7e-20
Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Frame = +1
Query: 262 ISQTKGEVDKSIDDVGW-KSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEK 438
I+ G D+S D K K P+++ D+ + F+ F L R +L G+
Sbjct: 266 ITSDDGSGDESEDAAEIEKQKSFFAPEEKPSANGDLKSAKS--FQAFSLSRPILRGLTSV 323
Query: 439 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTIQALIVV 609
G+ P+PIQ +IP+AL GKDV+ A G+GKTGA+ IP+LE++ P+K T + I++
Sbjct: 324 GFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILM 383
Query: 610 PTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
PTRELA+Q + +LA TDI GG +LR+
Sbjct: 384 PTRELAVQCYNVATKLATFTDITFCQLVGGFSLRE 418
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 99.1 bits (236), Expect = 1e-19
Identities = 41/111 (36%), Positives = 73/111 (65%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L ++L + + G+E+PSPIQ +IP L GKDV+ +A+ GTGKT A+ +P++E+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
+ P + +QAL++ PTRELA+Q ++ ++ +H ++ + GG ++ I
Sbjct: 68 LVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQI 118
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 98.3 bits (234), Expect = 2e-19
Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
Frame = +1
Query: 319 KLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK 498
K+K+ +R++K + + FEE L R LL + + G+ +P+PIQ +IP+AL+GK
Sbjct: 171 KIKVLQSNRKLKK--IVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGK 228
Query: 499 DVLARAKNGTGKTGAYCIPVLEQV---DPKKDTIQALIVVPTRELALQTSQICIELAKHT 669
D+LA A G+GKT A+ +PVLE++ D + I+ LI++PTRELALQ + LA+ +
Sbjct: 229 DILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFS 288
Query: 670 DIRVMVTTGG 699
+I + GG
Sbjct: 289 NITSCLIVGG 298
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 97.9 bits (233), Expect = 2e-19
Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 5/152 (3%)
Frame = +1
Query: 289 KSIDDVGWKSKLKIPPKDRRIKTSDVTDT---RGNEFEEFCLKRELLMGIFEKGWEKPSP 459
K+ + VG+ +I D + +D+ + F+ L +L GI ++G++ P+P
Sbjct: 2 KNTNIVGFADPKEISDNDEENEINDIKKKVYKKSGGFQSMALSFPILKGILKRGYKIPTP 61
Query: 460 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQ 633
IQ +IP+AL G+D++A A+ G+GKT + IP+ E++ ++ + +ALI+ PTRELALQ
Sbjct: 62 IQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKIRQAKVGARALILSPTRELALQ 121
Query: 634 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
T + EL + T ++ + GG N+ + I
Sbjct: 122 TLKFIKELGRFTGLKATIILGGDNMENQFSAI 153
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/112 (39%), Positives = 71/112 (63%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F E L ++ + E G+E+ +PIQE +IP+A+ GKD++ +A+ GTGKT A+ IP++E
Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
+ P +Q L+VVPTRELA+Q ++ + K IR + GG + R +
Sbjct: 63 AIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQV 114
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/108 (44%), Positives = 75/108 (69%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+FEE +K+ +L + + G+EK PIQEA+IP+ L+G+DV+ +A GTGKTGAY I +L+
Sbjct: 3 KFEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQ 62
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
++ + IQ LIV PTRELA+Q ++ + AK+T +R + GG ++
Sbjct: 63 EI-KEGGGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSM 109
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/111 (40%), Positives = 73/111 (65%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+E L +E++ I G+E+ +PIQ +IP++L KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
V+ K +QAL+V PTRELA+Q S+ ++ +RV+ GG ++ I
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQI 114
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ L+ ELL I E G+ +PSPIQ +IP L G+DV+ +A+ GTGKT A+ +P+L++
Sbjct: 7 FKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQR 66
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGG 699
+D ++QAL++ PTRELALQ + LAKH +R++ GG
Sbjct: 67 IDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGG 111
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 97.5 bits (232), Expect = 3e-19
Identities = 44/114 (38%), Positives = 71/114 (62%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+E L + I E G+E+P+P+Q ++ GKDV+ R+K GTGKT A+ IP+LE+
Sbjct: 22 FDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILER 81
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + AL++ PTRELA+Q +Q LAKH D+ V+ GG ++ + + ++
Sbjct: 82 IADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKL 135
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 97.1 bits (231), Expect = 4e-19
Identities = 42/107 (39%), Positives = 73/107 (68%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++F L +L+ I G+E+ +PIQ +IP+ LS KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
++P+ IQA+++ PTRELA+Q S+ ++ + +V+ GG ++
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDI 111
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 97.1 bits (231), Expect = 4e-19
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Frame = +1
Query: 220 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEF 399
T+N+ +VG ++S +D G K+ +RR K N F+
Sbjct: 25 TDNQKDKHENVGENVSD---------EDDGNYIASKLLESNRRTKGKKGNGKASN-FQSM 74
Query: 400 CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP- 576
L + LL IF+KG++ P+PIQ +IP+ L G+DV+ A+ G+GKT A+ IP++E +
Sbjct: 75 GLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKST 134
Query: 577 -KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
+ALI+ P RELALQT ++ + +K TD+R + GG +L +
Sbjct: 135 LANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEE 181
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 96.7 bits (230), Expect = 5e-19
Identities = 49/108 (45%), Positives = 71/108 (65%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F E + E+ I E G+E+PSPIQ +IP L+G DV+ +A+ GTGKT A+ IPV+E
Sbjct: 7 KFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVE 66
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+V + +QALI+ PTRELA+Q S +L+KH IR + GG ++
Sbjct: 67 KVSTGRH-VQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSI 113
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 96.7 bits (230), Expect = 5e-19
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Frame = +1
Query: 352 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 531
K + T + F+ L R +L G+ G+E P+ IQ+ +IP+AL GKD++ A G+G
Sbjct: 249 KEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSG 308
Query: 532 KTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 702
KT A+ +P+LE++ PKK T + LI+ PTRELA+Q + ++A TDI V + GG
Sbjct: 309 KTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGL 368
Query: 703 NLR 711
+L+
Sbjct: 369 SLK 371
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 95.9 bits (228), Expect = 9e-19
Identities = 53/178 (29%), Positives = 100/178 (56%), Gaps = 6/178 (3%)
Frame = +1
Query: 199 DKFGKMMTENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTR 378
+K K +N+ + +++ + S K E++ S K + P D + + T ++
Sbjct: 172 EKQAKKSNKNKNADADNKKSKKSNKKEEIESS-------EKFESFPMDENNEQEEETTSK 224
Query: 379 GNE----FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
+ F+ L + LL I +KG+ P+PIQ SIP+ L G D++ A+ G+GKTGA+
Sbjct: 225 KKKKTGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAF 284
Query: 547 CIPVLEQVDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
IP+++++ T ++A+I+ PTRELA+QT ++ + ++ T +R ++ GG ++ D
Sbjct: 285 VIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMED 342
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 95.9 bits (228), Expect = 9e-19
Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +1
Query: 376 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 555
+G F+ L +L I + G++ P+PIQ +IP+ L G+DV+A AK G+GKTG + IP
Sbjct: 36 KGGGFQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIP 95
Query: 556 VLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+ E++ + K +AL++ PTRELA+QT + +L K TD++ ++ GG ++
Sbjct: 96 LFEKLKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLGGDSM 148
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 95.9 bits (228), Expect = 9e-19
Identities = 44/109 (40%), Positives = 70/109 (64%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE+ L ++LL GIF G+E+PS IQ+ +I + GKDVLA+A++GTGKTG + I L++
Sbjct: 58 FEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQR 117
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
+DP + Q +I+ P RELA Q + + ++ +I GGT+ ++
Sbjct: 118 IDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQE 166
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 95.5 bits (227), Expect = 1e-18
Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Frame = +1
Query: 292 SIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEA 471
S D G K I P R +T+D TDT +F + +L I E+G++ P+PIQ
Sbjct: 55 SYGDTG-KISGSIHPLTYRNQTTDHTDTM--QFRSLAIIEPILQAIEEEGYQTPTPIQAE 111
Query: 472 SIPIALSGKDVLARAKNGTGKTGAYCIPVLE-----QVDPKKDTIQALIVVPTRELALQT 636
+IP+ L G D+L A+ GTGKT A+ IPVL+ + + KK I++LI+ PTRELA+Q
Sbjct: 112 AIPLILDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQI 171
Query: 637 SQICIELAKHTDIRVMVTTGGTN 705
+ +HT + V GG N
Sbjct: 172 GESFKAYGRHTGLTSTVIFGGVN 194
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/107 (44%), Positives = 74/107 (69%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F LK +LL I EKG+EKP+PIQ SIPIA++G D++ +A+ GTGKT ++ IP+L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
V K + +QAL++ PTRELA+Q ++ L++ I+V+ GG ++
Sbjct: 66 V-IKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSI 111
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 95.5 bits (227), Expect = 1e-18
Identities = 49/123 (39%), Positives = 79/123 (64%)
Frame = +1
Query: 361 DVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTG 540
DVT T F+ L+ +LL GI+ G+EKPS IQ+ +I + G+DV+A++++GTGKT
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 541 AYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
+ I VL+ +D + QALI+ PTRELA+Q + + L + +++ GGTN+ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 721 MRI 729
++
Sbjct: 151 RKL 153
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/116 (37%), Positives = 74/116 (63%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A++GTGKT + I +L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+Q++ + QAL++ PTRELA Q ++ + L + GGTN+R+++ ++
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKL 148
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 95.1 bits (226), Expect = 2e-18
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +1
Query: 331 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 510
P ++ + + F+ L + G+ KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 20 PDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVA 79
Query: 511 RAKNGTGKTGAYCIPVLEQVD-PKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVM 684
A+ G+GKT A+ IP+ E++ P+ T +ALI+ PTRELALQT + EL K T ++
Sbjct: 80 MARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTA 139
Query: 685 VTTGGTNLRD 714
+ GG ++ D
Sbjct: 140 LILGGDSMDD 149
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 95.1 bits (226), Expect = 2e-18
Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Frame = +1
Query: 349 IKTSDVTDTRGN--EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAK 519
+ T V D N FE+F L E+L+ I +KG+EKP+ IQ+ +P ALS KD++A+A+
Sbjct: 5 VNTGSVLDETKNYERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQ 64
Query: 520 NGTGKTGAYCIPVLEQVDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 696
GTGKT A+ IP+LE++D K + ++A+IV PTRELALQ + L +++ G
Sbjct: 65 TGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYG 124
Query: 697 GTNL 708
G +L
Sbjct: 125 GQSL 128
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 95.1 bits (226), Expect = 2e-18
Identities = 47/135 (34%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Frame = +1
Query: 337 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 516
KD + ++ + +F +F + + L G+ + G+ P+ IQ+ IP+ALSG+DVL A
Sbjct: 35 KDLEDRCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAA 94
Query: 517 KNGTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVM 684
K G+GKT A+ IP++E + +K D + AL++ PTRELA QT ++ +++ D+
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAG 154
Query: 685 VTTGGTNLRDDIMRI 729
+ GG +L+++ RI
Sbjct: 155 LIIGGKDLKNEQKRI 169
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/118 (37%), Positives = 74/118 (62%)
Frame = +1
Query: 376 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 555
+G EF EF + ++ + + G+E +PIQ ++P+ L G DV+ A+ GTGKT A+ IP
Sbjct: 2 KGLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIP 61
Query: 556 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
VLE ++ ++ QALI+ PTREL LQ S+ + K+ ++V+ GG ++ + I ++
Sbjct: 62 VLENLEAER-VPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQL 118
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 94.3 bits (224), Expect = 3e-18
Identities = 48/133 (36%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Frame = +1
Query: 337 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 516
K+ + K ++ G F+ L + ++ GI ++G++ P+PIQ +IPIAL G+DV+A A
Sbjct: 24 KENKKKAGKKSNKSGG-FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMA 82
Query: 517 KNGTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVT 690
+ G+GKT + IP+ E++ + K +ALI+ PTRELALQT + E+ + T ++ V
Sbjct: 83 RTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVI 142
Query: 691 TGGTNLRDDIMRI 729
GG ++ + I
Sbjct: 143 LGGDSMDNQFSAI 155
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 94.3 bits (224), Expect = 3e-18
Identities = 48/118 (40%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F+E L + + + G+ PSPIQ A IP AL+GKDV+ +A+ GTGKT A+ IP+L
Sbjct: 44 DSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPIL 103
Query: 562 EQVDPKKD--TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
EQ+D +D QA+++VPTRELA Q + LA+ + V +GG N+ + ++
Sbjct: 104 EQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQL 161
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 93.9 bits (223), Expect = 4e-18
Identities = 42/106 (39%), Positives = 70/106 (66%)
Frame = +1
Query: 403 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK 582
L EL + + G+++P+PIQ +IP+AL G D+L +A GTGKTGA+ IP++E++ K
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGK 66
Query: 583 DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
++AL++ PTRELA+Q + L K+ + V GGT+++ ++
Sbjct: 67 PDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNL 112
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 93.5 bits (222), Expect = 5e-18
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++F L E+L I E+G+ P+PIQ +IP+ LSG+DV+ A+ GTGKT ++ +P++++
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 568 VDPKKDT--------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 723
+ P+ +T ++ALI+ PTRELA Q + AKHT +R V GG ++ +
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 132
Query: 724 RI 729
+
Sbjct: 133 EL 134
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 93.5 bits (222), Expect = 5e-18
Identities = 46/113 (40%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKD-VLARAKNGTGKTGAYCIPVL 561
+F++ L +L I KG+E P+PIQE IP+ LSGK+ V+ +A+ GTGKT A+ IP++
Sbjct: 3 KFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLI 62
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
E++D K + +QAL++ PTRELALQ L + + ++ GG ++ + I
Sbjct: 63 ERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQI 115
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 92.7 bits (220), Expect = 8e-18
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 564
F E L +L + + + +P+PIQ +I AL+GKD++A A+ GTGKT A+ +P ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 565 -QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+P++ ++ALI+ PTRELALQ ++ +++A+ T IR V GG N R + I
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDI 119
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 92.7 bits (220), Expect = 8e-18
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L + +L + E G+EKPSPIQE +IP AL+G+DVL A+ GTGKT A+ P+L++
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 568 VD---PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ P I++LI+ PTRELALQ + KH +R V GG + + ++
Sbjct: 63 LGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKL 119
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 92.7 bits (220), Expect = 8e-18
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Frame = +1
Query: 370 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTGKT A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 547 CIPVLEQV--DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+P+LE++ PK + L++VPTRELA+Q Q+ +L+ + V + GG +L+
Sbjct: 203 VLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLK 260
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 92.3 bits (219), Expect = 1e-17
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + ++++L+ + P+P+QE SIP L GKD+LA A+ GTGKT A+ +P+++
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 568 VDPKK--DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
V KK T ALI+VPTRELA Q + A+HTD+R++ GGT++
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSI 117
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 91.9 bits (218), Expect = 1e-17
Identities = 44/106 (41%), Positives = 66/106 (62%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + +K E+L + E G+EKP+ IQEA +P A GKD++ +A+ GTGKT A+ IP+L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
+D + IQ L++ PTRELA Q L K+T ++ + GG +
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVS 108
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F++ LK LL I + G+E+PS IQ SIP+AL G D++ +A+ GTGKT A+ ++
Sbjct: 5 KFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIIN 64
Query: 565 QVD--PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
D KK + +ALI+ PTRELA+Q ++ + L KH + V+ GG
Sbjct: 65 NADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGG 111
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 91.9 bits (218), Expect = 1e-17
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F++ LK+ +L I+ G++KP+PIQ S+ I L G+D L RAK GTGKT A+ IP L+
Sbjct: 6 QFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQ 65
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNL 708
+ + Q LI+ P REL Q SQ I+L K + RV TGG L
Sbjct: 66 HLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL 114
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 91.9 bits (218), Expect = 1e-17
Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE L + I +KG++ P+PIQ ++P+ LSG DV+A A+ G+GKT A+ IP+LE+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 568 VDP--KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
+ + ++ALI+ PTR+LA QT + EL K TD+RV + GG ++ D
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMED 140
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 91.5 bits (217), Expect = 2e-17
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +1
Query: 331 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 510
P ++ + + F+ L + G+ +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 133 PDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVA 192
Query: 511 RAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVM 684
A+ G+GKT + IP+ E++ + +AL++ PTRELALQT + EL K T +++
Sbjct: 193 MARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKFTGLKMA 252
Query: 685 VTTGGTNLRD 714
+ GG + D
Sbjct: 253 LILGGDRMED 262
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/112 (38%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ F LL + +KG+ PSPIQ+A+ P + G+D++ +A+ GTGKT A+ +P+LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 568 VDPKKDTIQALIVVPTRELALQTS-QICIELAKHTDIRVMVTTGGTNLRDDI 720
++ + T Q L++ PTRELA+Q + A H ++V+ GGT+ R I
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQI 184
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 91.5 bits (217), Expect = 2e-17
Identities = 45/109 (41%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
EF++F LK E+L + +G P+PIQ A++P+AL GKD++ +A+ GTGKT A+ +P+ E
Sbjct: 2 EFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAE 61
Query: 565 QVDPKKD---TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 702
++ P ++ +AL++ PTRELALQ + +A H ++V+ GGT
Sbjct: 62 RLAPSQERGRKPRALVLTPTRELALQVASELTAVAPH--LKVVAVYGGT 108
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 91.5 bits (217), Expect = 2e-17
Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L LL + +KG+ +P+ IQ A+IP AL G+DVL A GTGKT AY +P L+
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65
Query: 568 V--DPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ P+K + + LI+ PTRELA+Q S ELAKHT + + TGG
Sbjct: 66 LLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGG 113
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 91.5 bits (217), Expect = 2e-17
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Frame = +1
Query: 274 KGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKP 453
KG D ID+ + K + + F L R +L G+ G+ KP
Sbjct: 195 KGGKDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKP 254
Query: 454 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTREL 624
SPIQ A+IPIAL GKD++A A G+GKT A+ IP++E++ P K + + ++++PTREL
Sbjct: 255 SPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTREL 314
Query: 625 ALQTSQICIELAKH-TDIRVMVTTGGTNLR 711
A+Q + + ++A+ + I + GG NLR
Sbjct: 315 AIQVADVGKQIARFVSGITFGLAVGGLNLR 344
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
NEF L ELL + E G+E +PIQ+ SIP+ L+GKD++ +AK G+GKT A+ +P+L
Sbjct: 47 NEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPIL 106
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRD 714
+++ + +QALI+ PTRELA Q +L + ++V+ TGG + R+
Sbjct: 107 NKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGRE 158
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/111 (36%), Positives = 69/111 (62%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F LK +L+ + + G+ +P+PIQE +IP+ L+G D++ +A+ GTGKT A+ +P+L
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
+D K +QAL++ PTRELA Q + V+V GG++ + +
Sbjct: 117 IDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQV 167
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F L LL + E G+ +P+PIQ +IP A+SG+DV+A A G+GKT A+ +P+L Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 568 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+D + T +AL++ PTRELA Q + +LA HT I GG ++R
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIR 111
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 91.1 bits (216), Expect = 3e-17
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + LK +L + + G+EKPSPIQ IP L+G+DVL A+ G+GKT A+ +P+L+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGG 699
+DP+ Q L++ PTRELA+Q ++ + +KH + V+ GG
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 112
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 91.1 bits (216), Expect = 3e-17
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +1
Query: 331 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 510
P ++ + + F+ L + GI +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 79 PDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVA 138
Query: 511 RAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVM 684
A+ G+GKT + +P+ E++ + +ALI+ PTRELALQT + EL K T ++
Sbjct: 139 MARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTA 198
Query: 685 VTTGGTNLRD 714
+ GG + D
Sbjct: 199 LILGGDRMED 208
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/118 (38%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Frame = +1
Query: 367 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
T + F+ L LL I KG+ P+PIQ SIP+ L +DV+ A+ G+GKT A+
Sbjct: 85 TGKKSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAF 144
Query: 547 CIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
IP++E++ + +ALI+ P+RELALQT ++ E K TD++ ++ GG +L D
Sbjct: 145 VIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLED 202
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 90.6 bits (215), Expect = 3e-17
Identities = 39/108 (36%), Positives = 69/108 (63%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ L + + + E+G+ P+P+Q + A+ GKD++ R+K GTGKT A+ +P+LE+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+ + ++ALI+ PTRELALQ + LAKH +++ GG +++
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMK 138
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/115 (37%), Positives = 70/115 (60%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F + L ++L + + G+ + +PIQEA+ PI +G D+ A A+ G+GKT A IP+++
Sbjct: 2 KFSDLELSADILKALDKMGYNEMTPIQEATYPIIFAGHDLCALAETGSGKTAACAIPLIQ 61
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+VDP D IQ L++VPTREL +Q + ++A TD+ GG + I R+
Sbjct: 62 KVDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDVIPYAVYGGFDRAAQIARV 116
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/109 (39%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ L EL+ GI ++G++ P+PIQ +IP+ L G+DV+A AK G+GKT + IP+ E+
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 568 VDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+ ++ T +ALI+ PTRELA+QT + EL + +++ ++ GG ++
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSM 149
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 90.2 bits (214), Expect = 4e-17
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
Frame = +1
Query: 403 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPK- 579
L R+L + GW+ P+ +QE IPI L+G+D L A G+GKTGA+ IP+LE++ +
Sbjct: 8 LSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLERMILRG 67
Query: 580 KDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
+DT ALI+ PTRELA QT+ + ELA T+ RV + GGT+
Sbjct: 68 RDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTD 111
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 90.2 bits (214), Expect = 4e-17
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 568 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTI 140
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 90.2 bits (214), Expect = 4e-17
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Frame = +1
Query: 355 TSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGK 534
T D + F E L R LL G++KP+PIQ A IP+AL+G+D+ A A G+GK
Sbjct: 158 TVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGK 217
Query: 535 TGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
T A+ +P LE++ PK+ + LI+ PTRELA+Q + LA+ TDI+ + GG +
Sbjct: 218 TAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLS 277
Query: 706 LRD 714
+R+
Sbjct: 278 VRE 280
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 89.8 bits (213), Expect = 6e-17
Identities = 40/85 (47%), Positives = 61/85 (71%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L LL + E G+E PSPIQ A+IP+ L+ +DVL +A+ GTGKT ++ +P+L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 568 VDPKKDTIQALIVVPTRELALQTSQ 642
+D K+ T QAL++ PTRELA+Q ++
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAE 93
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/127 (35%), Positives = 74/127 (58%)
Frame = +1
Query: 349 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 528
++ D D FE+ + EL E GW++P+ IQ +IPIALSGKD++ A+ G+
Sbjct: 30 VEEDDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGS 89
Query: 529 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
GKT A+ IP+L+++ K + +LI+ PTREL+LQ + I L + V + GG ++
Sbjct: 90 GKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDM 149
Query: 709 RDDIMRI 729
+++
Sbjct: 150 VSQALQL 156
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 89.8 bits (213), Expect = 6e-17
Identities = 44/111 (39%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ L R LL I G+++P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279
Query: 568 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+ P++ + + L++VPTREL +Q + +LA+ +I + GG +++
Sbjct: 280 LIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVK 330
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 89.8 bits (213), Expect = 6e-17
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Frame = +1
Query: 286 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 465
D DD + ++ + + T +G F+ L LL I KG+ P+PIQ
Sbjct: 59 DSDEDDEAFIAEKQTSANRKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQ 118
Query: 466 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTS 639
+IP+ + +DV+ A+ G+GKT A+ IP++E++ K + LI+ P+RELALQT
Sbjct: 119 RKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTL 178
Query: 640 QICIELAKHTDIRVMVTTGGTNLRD 714
++ EL K TD++ ++ GG +L +
Sbjct: 179 KVVKELGKGTDLKSVLLVGGDSLEE 203
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 89.4 bits (212), Expect = 8e-17
Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 367 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
T + +F E L E+ I E G+E+ SPIQ +IP+ L GKD++ A+ GTGKT A+
Sbjct: 4 TSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAF 63
Query: 547 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNL 708
IP +E ++ + +QALI+ PTREL +Q S+ +L K+ + V+ GG +
Sbjct: 64 AIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEI 118
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 89.4 bits (212), Expect = 8e-17
Identities = 45/112 (40%), Positives = 68/112 (60%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
EF++ L LL + + G+E P+PIQ+ +IP+ L G +++ +A GTGKT AY +PVL+
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
++ K Q LIV PTRELALQ + +L K+ +R + GG + I
Sbjct: 63 RIQRGKKA-QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQI 113
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 89.4 bits (212), Expect = 8e-17
Identities = 42/101 (41%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLE 564
FEE LK ELL G++ G+ KPS IQEA++PI + S +++A++++GTGKT A+ + +L
Sbjct: 72 FEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGMLN 131
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMV 687
VDP + QA+ + PT+ELALQT ++ ++ + ++I+ ++
Sbjct: 132 CVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLL 172
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 89.4 bits (212), Expect = 8e-17
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Frame = +1
Query: 286 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 465
D DD + + + + + +G F+ L LL I +KG++ P+PIQ
Sbjct: 46 DDGSDDEAFIAAKQAAANRKNANAPGKSGKKGGGFQAMGLNVALLKAIAQKGFKIPTPIQ 105
Query: 466 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQA--LIVVPTRELALQTS 639
++P+ L G DV+ A+ G+GKT A+ IP++E++ + A +I+ P+RELALQT
Sbjct: 106 RKAVPLILQGDDVVGMARTGSGKTAAFVIPMIERLKTHSAKVGARGVIMSPSRELALQTL 165
Query: 640 QICIELAKHTDIRVMVTTGGTNLRD 714
++ E + TD+R ++ GG +L +
Sbjct: 166 KVVKEFGRGTDLRTILLVGGDSLEE 190
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Frame = +1
Query: 352 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 531
+TSD+ F + L +++L G+ G+ KPSPIQ SIP+ G D++ RAK+GTG
Sbjct: 14 RTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTG 73
Query: 532 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIEL 657
KT + I LE +D K ++Q +I+ PTRE+A+Q ++ L
Sbjct: 74 KTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASL 115
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 89.0 bits (211), Expect = 1e-16
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F E L LL + + GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY +PV++
Sbjct: 7 QFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPVIQ 66
Query: 565 QVDPKKDT-----IQALIVVPTRELALQTSQICIELAKH--TDIRVMVTTGGTNL 708
++ K + ++ALI+VPT+EL Q + +L + D+RV +G +L
Sbjct: 67 RILASKQSVREQDVKALILVPTKELGQQVQTMIRQLTAYCSRDVRVADISGKADL 121
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F +F LK + + E G+++PSP+Q+ +IP+ L G D++A+A+ GTGKT A+ +P++
Sbjct: 2 KFTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMS 61
Query: 565 QVDPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ K D +++ L++VPTRELA+Q S K + ++ GGT I RI
Sbjct: 62 MM--KADGSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERI 115
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 89.0 bits (211), Expect = 1e-16
Identities = 57/141 (40%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Frame = +1
Query: 334 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 513
P +KTSD ++ F++F L L I + G+E + +QEA++PI L GKDVLA+
Sbjct: 367 PTGEHVKTSDSYLSK-TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAK 425
Query: 514 AKNGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAK-H 666
AK GTGKT A+ +P +E V D ++ I L+V PTRELA Q + L K H
Sbjct: 426 AKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYH 485
Query: 667 TDIRVMVTTGGTNLRDDIMRI 729
I V V GGT L + R+
Sbjct: 486 PSIGVQVVIGGTKLPTEQRRM 506
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L +L + + G+E PSPIQ++ IP L+G DVL A+ G+GKT A+ +P+L Q
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGG 699
+DP + Q L++ PTRELA+Q + C K+ R++ GG
Sbjct: 67 IDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGG 111
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ L LL I KG+ P+PIQ +IP+ L +DV+ A+ G+GKT A+ IP++E+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 568 VDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
+ + +A+I+ P+RELALQT ++ EL K TD++ ++ GG +L +
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEE 198
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ F ++ GI + G+ P+PIQE IP AL G+DV+ A+ GTGKT A+ +P+L++
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQR 62
Query: 568 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + ++A+IV PTRELA Q + L K+T +R + GG + I R+
Sbjct: 63 LMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRL 117
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/91 (47%), Positives = 62/91 (68%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
++ F L +L GI GW++P+ IQEA +PIAL GKD+LA+A+ G+GKTGAY IP+++
Sbjct: 12 QWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGKTGAYLIPIVQ 71
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIEL 657
++ T +ALI+ PTREL Q + EL
Sbjct: 72 RILHIAST-RALIIGPTRELCSQIEAVVREL 101
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 88.6 bits (210), Expect = 1e-16
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 20/188 (10%)
Frame = +1
Query: 226 NRISSSNHVGNSI--SQTKGEVDKSIDDVGWKSK-LK-IPPKDRRIKTSDVT-DTRGN-- 384
N +++N++ N+ S G+ + D W K LK + +D I D T+G
Sbjct: 349 NNNNNNNNINNNNNGSMIGGKQISELPDTHWSKKPLKSMTKRDWHIFKEDFNISTKGGIA 408
Query: 385 -----EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 549
++E L RE+L I + G+EKPSPIQ SIPI+L+G+D+L A+ G+GKT A+
Sbjct: 409 PNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFV 468
Query: 550 IPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
IP+L + D + D AL++ PTREL Q + A+H RV+ GG +
Sbjct: 469 IPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQS 528
Query: 706 LRDDIMRI 729
+ D ++
Sbjct: 529 IEDQAYQV 536
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 88.6 bits (210), Expect = 1e-16
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 7/125 (5%)
Frame = +1
Query: 358 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 537
S T+ + F F L R +L + + KP+PIQ +IPIAL+GKD++A A G+GKT
Sbjct: 325 SKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKT 384
Query: 538 GAYCIPVLEQV-------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 696
A+ IP +E++ P + + LI+ PTRELA+Q + +AK TDIR + G
Sbjct: 385 AAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVG 444
Query: 697 GTNLR 711
G +++
Sbjct: 445 GLSVK 449
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 88.6 bits (210), Expect = 1e-16
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 510
PPK + IK S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL
Sbjct: 29 PPK-KDIKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 86
Query: 511 RAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMV 687
+AK+G GKT + + L+Q++P + L++ TRELA Q S+ +K+ ++V V
Sbjct: 87 QAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSV 146
Query: 688 TTGGTNLRDD 717
GG +++ D
Sbjct: 147 FFGGLSIKKD 156
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/88 (45%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +1
Query: 448 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP-KKDTIQALIVVPTREL 624
+P+ IQE +IP+ L+GKDV+ R+K G+GKT AY +PVL V+ K +++A+I++PTREL
Sbjct: 18 EPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEKLKGKSVKAIIILPTREL 77
Query: 625 ALQTSQICIELAKHTDIRVMVTTGGTNL 708
ALQT ++ L K + I+ + GG ++
Sbjct: 78 ALQTHRVASRLGKISGIKSTIVYGGASI 105
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ L R LL I + +P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 568 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+ P++ + + L++VPTREL +Q + +LA+ T++ + GG +++
Sbjct: 243 LIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVK 293
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = +1
Query: 439 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 618
G+ P+PIQE +IP+ L GKD++A + GTGKT AY IP+L ++DP+ +QA+I+ P+
Sbjct: 29 GFTAPTPIQEEAIPLILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSH 88
Query: 619 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
ELA+Q Q + K +I GG N++ I
Sbjct: 89 ELAMQIHQTIEKWTKDNNISSEPLIGGANIKRQI 122
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
+ + L E++ I +KG+ + +P+Q +IP + KDV+A+A GTGKT A+ IP++E
Sbjct: 14 YADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPMVEH 73
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDI 720
+DP+ D +QAL++ PTRELALQ +L + + +R + GG + I
Sbjct: 74 IDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQI 125
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 88.2 bits (209), Expect = 2e-16
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 564
F++ L LL I + G+E PS IQE +IP L+ +D++A A+ GTGKT A+ P+L+
Sbjct: 3 FDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLLQ 62
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRI 729
+D T Q LI+ PTREL LQ + AKH +RV+ GG+N+++ I
Sbjct: 63 NIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREI 118
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 88.2 bits (209), Expect = 2e-16
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +1
Query: 352 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 531
++SDV + FEE L R LL G+ + P+ IQ A+IP+AL+ D++ ++K+GTG
Sbjct: 15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74
Query: 532 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK-HTDIRVMVTTGGTNL 708
KT Y I V++ +P + A+IVVPTRELA+Q L K D + GGT++
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
Query: 709 RDDIMRI 729
D R+
Sbjct: 135 AKDRKRM 141
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/106 (40%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Frame = +1
Query: 403 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE--QVDP 576
L + +L I KG+++P+PIQ +IP+ L GKDV+ A+ G+GKT A+ +P+LE +V
Sbjct: 109 LSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVHS 168
Query: 577 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
K +A+I+ P+RELALQT ++ + + TD+R+ + GG +L +
Sbjct: 169 AKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEE 214
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +1
Query: 340 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 519
D + +T DV F L ++ G+ G++KPSPIQ +IP+ G D++ ++K
Sbjct: 10 DAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSK 69
Query: 520 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTG 696
+GTGKT + LE V+ KD +Q LI+VPTRE+A+Q + + H + +++ G
Sbjct: 70 SGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIG 129
Query: 697 GTNLRDDIMR 726
G L DD+ +
Sbjct: 130 GRPLEDDLKK 139
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 87.8 bits (208), Expect = 2e-16
Identities = 37/114 (32%), Positives = 73/114 (64%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E + +E + + + G+ P+ IQ +IP LSG+DV+ +++ GTGKT A+ +P+LE+
Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+DP++ +QA+++ PTRELA+Q + ++ +R + GG ++ ++++
Sbjct: 65 LDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQL 118
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 87.8 bits (208), Expect = 2e-16
Identities = 42/116 (36%), Positives = 75/116 (64%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N+F + + E+ + + +P+P+Q +IP L+ +DV+A+A+ GTGKT A+ +P+L
Sbjct: 3 NKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPIL 62
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
E+V+ +K TIQALI+ PTRELA+Q + +LA+ I ++ GG ++ + ++
Sbjct: 63 ERVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKL 118
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/111 (38%), Positives = 72/111 (64%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+E + + + G+++P+PIQ+ SIP AL G D+L +A+ GTGKTGA+ IP++E+
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
V K+ +Q+LI+ PTRELA+Q ++ E ++ ++V+ GG + I
Sbjct: 64 VVGKQG-VQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQI 113
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 87.4 bits (207), Expect = 3e-16
Identities = 45/113 (39%), Positives = 62/113 (54%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F +F LK++LL + E G+E+PS +Q IP A+ GKDVL +AK GTGKT + + VL
Sbjct: 38 SSFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVL 97
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
Q+ L++ TRELA Q L K T+ +V GG DI
Sbjct: 98 NQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDI 150
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 87.4 bits (207), Expect = 3e-16
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Frame = +1
Query: 373 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG-KDVLARAKNGTGKTGAYC 549
T + FE F L ++ + + G+ P+PIQ ++PI L+G D + A GTGKT A+
Sbjct: 41 TTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFG 100
Query: 550 IPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
IP++E +D QAL++ PTRELALQ ++ L K +RV+ GG + R I
Sbjct: 101 IPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQI 157
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+FE F E+L I E G++ +P+Q+ +IP G+DVLA A+ GTGKT A+ +P+L+
Sbjct: 2 KFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQ 61
Query: 565 QVDPKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
++ + T+Q ALI+ PTRELA Q + +KH +I V+ GG + ++
Sbjct: 62 KMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKL 121
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L L + E G+ +P+PIQ ++P L+G+DV A+ GTGKT A+ +P+L +
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL---RDDIMR 726
+ + ++ L++ PTRELALQ + + +K+TD+ V GG R+D+ R
Sbjct: 195 LGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQR 250
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+E L R L G++KP+PIQ A IPIA++G+DV RA G+GKT A+ +P LE+
Sbjct: 150 FDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLER 209
Query: 568 V---DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ P+ L++VPTRELA+Q Q+ LA+ T IR ++ GG
Sbjct: 210 MLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGG 257
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 564
F+ L E+L + +KG+ P+PIQE +IPI + GK D++ +A+ GTGKT A+ IP+LE
Sbjct: 4 FKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+D QALI+ PTRELA+Q ++ + + V GG ++ I +
Sbjct: 64 TIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIREL 118
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/115 (34%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+E L ++L+ + + + + + IQ +IP+ L GK++ ++ GTGKT ++ +P+LE+
Sbjct: 3 FKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEK 62
Query: 568 VDPKKDTIQALIVVPTRELALQ-TSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
++P K +QA+I+ PTRELA+Q +QI I ++ ++ + GG ++RD I R+
Sbjct: 63 IEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRL 117
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/106 (37%), Positives = 67/106 (63%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N+F ++ L E++ + + +P+PIQE IP+AL GKD++A++K G+GKT A+ IP+
Sbjct: 4 NKFTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPIC 63
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
E + +++ QAL++ PTRELA Q + + ++V V GG
Sbjct: 64 ESIVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGG 109
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 87.0 bits (206), Expect = 4e-16
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F F L +L I + GW +P+ +Q ASIP AL GKD+L A+ G+GKT AY +P L +
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 568 V---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
V K I+ L++VPTRELA Q + C L + T ++ ++ GG
Sbjct: 62 VLSERKPKAGIRVLVMVPTRELAQQVMKDCEALTQQTGLKTVIIRGG 108
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FEE L ++ + + +E P+P+Q +IPIAL G+DV A A G+GKT A+ IP +E+
Sbjct: 18 FEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPTVER 77
Query: 568 VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG-TNLRDDIMRI 729
+ K T +A+I+ PTRELA QT + ++ + T + ++ TGG +N++++ R+
Sbjct: 78 LLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALLLTGGSSNVKEEEERL 135
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/120 (33%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ L ++L + E+G+ +P+PIQ+ +IP L G+D++A A+ GTGKT + +P+L+
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 568 VDPK------KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + + ++ALI+ PTRELA Q + + +K+ +IR +V GG ++ +M++
Sbjct: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 87.0 bits (206), Expect = 4e-16
Identities = 47/113 (41%), Positives = 70/113 (61%), Gaps = 9/113 (7%)
Frame = +1
Query: 370 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 549
D+ FE L LL + + GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY
Sbjct: 3 DSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYA 62
Query: 550 IPVLEQVDPKKDT-------IQALIVVPTRELALQTSQICIELAKH--TDIRV 681
IP+L+ + +K T ++ L++VPT+ELA Q + +LA + D+RV
Sbjct: 63 IPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVRV 115
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/93 (45%), Positives = 62/93 (66%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L+ LL GI ++ W P+ +Q +IP+AL G+D+LAR+ GTGKTGAY +P+L
Sbjct: 49 FAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLLPILHN 108
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH 666
+K +LI+VPT+ELALQ +++ L+ H
Sbjct: 109 TLLRKGK-TSLILVPTKELALQITKVAKALSAH 140
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F E L EL + G+E+P+PIQ +IP+ L G D+LA A+ GTGKT ++ +P++
Sbjct: 4 SSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPII 63
Query: 562 EQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
E++ ++AL++ PTRELA+Q + +E + +RV+ GG + + I R+
Sbjct: 64 EKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRL 123
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 86.6 bits (205), Expect = 5e-16
Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F L LL I E+G+E+PSPIQE SIP L GKDVL A+ GTGKT A+ +P+L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTN 705
+ Q L++ PTRELA Q + +KH ++++V GG++
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSD 114
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 86.6 bits (205), Expect = 5e-16
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FEE L R+LL I E G+ +P+ IQ +IP L+G D++ A+ GTGKT AY +P+L +
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 568 VD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ + +A+I PTREL +Q +LAK+TD+R++ GG
Sbjct: 67 IKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGG 111
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 86.6 bits (205), Expect = 5e-16
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 513
P + +K S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL +
Sbjct: 30 PAKKDVKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQ 88
Query: 514 AKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVT 690
AK+G GKT + + L+Q++P + L++ TRELA Q S+ +K+ +++V V
Sbjct: 89 AKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVF 148
Query: 691 TGGTNLRDD 717
GG +++ D
Sbjct: 149 FGGLSIKKD 157
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F LK ELL I + G+E PS +Q IP A+ G DV+ +AK+G GKT + + L+Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLR 711
++P + AL++ TRELA Q + + + D +V V GG N++
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIK 156
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/118 (34%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Frame = +1
Query: 367 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
T + F F L + +L I KG+ +P+PIQ +IP+ L +D++ A+ G+GKT A+
Sbjct: 132 TKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAF 191
Query: 547 CIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
+P++E++ I +A+I+ P+RELA+QT + + A+ T++R ++ TGG +L +
Sbjct: 192 ILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEE 249
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 86.2 bits (204), Expect = 7e-16
Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Frame = +1
Query: 307 GWKSKLKIPPKDRRIKTSDVTDTRG-------NEFEEFCLKRELLMGIFEKGWEKPSPIQ 465
G K + K KD + + +T+ + F +F L ++ L G+ + + KP+ IQ
Sbjct: 30 GGKPRFKFSMKDEESEIARLTELYATAKIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQ 89
Query: 466 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTIQALIVVPTRELALQ 633
SI AL GKD+LA AK G+GKT A+ IPV E++ K D + ALI+ PTRELALQ
Sbjct: 90 RESILPALQGKDILAAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQ 149
Query: 634 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ ++ K D + GG NL+ + R+
Sbjct: 150 IFETVAKIGKLHDFTTGLIIGGQNLKAEKNRL 181
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 86.2 bits (204), Expect = 7e-16
Identities = 41/110 (37%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE L E+ G+ KG+ P+PIQ ++P+ L+G D+ A A+ G+GKT A+ +P++++
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 568 VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+ + D I+ALI+ PTR+LA QT + +L K TD+++ + GG ++
Sbjct: 111 L-RRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSM 159
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 86.2 bits (204), Expect = 7e-16
Identities = 47/132 (35%), Positives = 77/132 (58%), Gaps = 4/132 (3%)
Frame = +1
Query: 346 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 525
+I D T+ F++ + L G+ E + K + IQ SIP++L G DVLA AK G
Sbjct: 29 KIDEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTG 88
Query: 526 TGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT 693
+GKT A+ +PV+E++ +K D + ALI+ PTRELA+Q ++ ++ HT +
Sbjct: 89 SGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVI 148
Query: 694 GGTNLRDDIMRI 729
GG +++ ++ RI
Sbjct: 149 GGKDVKFELERI 160
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 85.8 bits (203), Expect = 1e-15
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 564
FEE + E+ I E G+E P P+QE IP L DV+A A+ GTGKT A+ +P+L+
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQ 63
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDI 720
Q+D K Q+LI+ PTREL LQ + + +K+ D ++V+ GG+++ I
Sbjct: 64 QIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQI 116
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 85.8 bits (203), Expect = 1e-15
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N F + L ++ + G++ P PIQ IP+ L G D+L A G+GKT A+ +P+L
Sbjct: 6 NSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLL 65
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD--IRVMVTTGGTNLR 711
+ +D K+ +Q LI+VPTRELA+Q +C+ K I + V GG N R
Sbjct: 66 QNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYR 117
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 85.8 bits (203), Expect = 1e-15
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Frame = +1
Query: 328 IPPKDRRIKTSDVTDTRGNE--FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKD 501
+ KD S++ + N FE+ L E + I E G+ P+PIQ +IP L GKD
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 502 VLARAKNGTGKTGAYCIPVLE----QVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 669
++A A+ GTGKT A+ +P++E + PK+ + +L++ PTRELA Q K+
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 670 DIRVMVTTGGTNLRDDIMRI 729
+R GG ++R + R+
Sbjct: 124 ALRSDAVFGGVSIRPQVKRL 143
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 85.8 bits (203), Expect = 1e-15
Identities = 36/97 (37%), Positives = 64/97 (65%)
Frame = +1
Query: 439 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 618
G++KP+P+QE + + + GKDV+A + GTGKT AY +PVLE++ P++ QA+I+ P+R
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSR 82
Query: 619 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
EL +Q Q+ + +++R GG N++ + ++
Sbjct: 83 ELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKL 119
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE L +L + ++G+ P+PIQE SIPI L GKD+L A+ GTGKT A+ IP+L++
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQK 62
Query: 568 V---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ D +K I+AL++ PTRELA+Q + ++T ++ V GG
Sbjct: 63 LYKTDHRKG-IKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGG 108
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ L E++ I G+ + +PIQE +IPI ++GKD+ +A+ GTGKT A+ IP +E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAK----HTDIRVMVTTGGTNLRDDI 720
VD + Q+LI+ PTRELAL Q+C EL K +RV+ GG ++ I
Sbjct: 63 VDISINQTQSLILCPTRELAL---QVCTELKKLSKFKKGLRVLAVYGGESIERQI 114
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
+ + L E+ + + +PSPIQ A IP+AL G+DVL +A+ GTGKT A+ IP++E+
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 568 VD--PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
++ P QALI+ PTRELA+Q +L I V+ GG LR + ++
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKL 121
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 568 VD----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ K I+AL++ PTRELA Q S+ K+ +R V GG + I ++
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/110 (38%), Positives = 69/110 (62%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
+E++ LK +LL GI+ G+E PS IQ+A+I + G+D+ A+A++GTGKTGA+ + L+
Sbjct: 40 WEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQI 99
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 717
D +D Q L++ TRE+A Q + +L RV + +GG+ + D
Sbjct: 100 CDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAAD 149
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/90 (44%), Positives = 59/90 (65%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ FE L LL GIF G+EKPS IQ+ +I + G DV+A++++GTGKT Y I L
Sbjct: 21 DSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAAL 80
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICI 651
+++D K+ QA+I+ PTRELA Q ++ +
Sbjct: 81 QRIDMMKEDTQAIILAPTRELANQIQKVVL 110
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 85.0 bits (201), Expect = 2e-15
Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+FEE + +LL I E G+ + +PIQE SIP L GKD+ A+ GTGKT A+ IPV+
Sbjct: 2 KFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIH 61
Query: 565 QVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLR 711
+ K I AL++ PTREL +Q ++ +L KH++ IR + GGT+ +
Sbjct: 62 NILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYK 112
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/115 (35%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N F +F + +L + KG++ P+PIQ+A+IP + G+D+L +A+ GTGKT A+ +P++
Sbjct: 51 NGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLI 110
Query: 562 EQV-DPKKDTIQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNLRDDI 720
E++ D K+ + L++ PTRELA Q ++ ++ T+ + + GGT+ R+ I
Sbjct: 111 EKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQI 165
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/114 (35%), Positives = 67/114 (58%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE+F L ++L + G+ PS +Q IP L G++++ R+K G+GKT ++ IP+ E
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
++ + IQALIVVPTRELALQ ++ + +R G +++D I +
Sbjct: 65 INVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAEL 118
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 568 VD----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ K I+AL++ PTRELA Q S+ K+ +R V GG + I ++
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 85.0 bits (201), Expect = 2e-15
Identities = 36/87 (41%), Positives = 58/87 (66%)
Frame = +1
Query: 439 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 618
GW+ P+Q ++P G+D++ +++ G+GKTGA+ +P+LE++DP + + QAL++VPTR
Sbjct: 56 GWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPTR 115
Query: 619 ELALQTSQICIELAKHTDIRVMVTTGG 699
ELALQ L + T +RV GG
Sbjct: 116 ELALQVEHEARTLFEGTGLRVAAVYGG 142
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 84.6 bits (200), Expect = 2e-15
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Frame = +1
Query: 229 RISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTD----TRGNEFEE 396
+I G+ + E D D + K K K+ + + + D+ D T +
Sbjct: 97 QIKEEEDAGDDVGLFVSEEDLKKDAIKTKEK-KVKKEKAKAEDQDLIDFEECTNYDTLAT 155
Query: 397 FC---LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F L R LL + + P+PIQ A+IP+AL G+D+ A GTGKT AY +P LE+
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLER 215
Query: 568 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+ P + + L++VPTREL +Q Q+ +L++ T + V ++ GG +++
Sbjct: 216 LLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGGLDVK 266
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = +1
Query: 370 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 549
DT + F++ LK LL G++ G+EKPS IQ+ +I + G DV+A+A++GTGKT +
Sbjct: 26 DTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFV 85
Query: 550 IPVLEQVDPKKDTIQALIVVPTRELALQ 633
I +L+++D QALI+ PTRELA Q
Sbjct: 86 ISILQRIDTSLKETQALILAPTRELAQQ 113
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/113 (34%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F + L +L + E G+ P+PIQ A+IP+ L G+D L +A+ GTGKT A+ +P+L
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDI 720
+++ + QA+++ PTRELA+Q + L ++ ++V+ GG ++ D +
Sbjct: 87 KLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQM 139
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/118 (34%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
++F + L E+L + G E+P+ IQE +IP L GK+V+ +A+ GTGKT AY +P++
Sbjct: 2 DKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPII 61
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT--GGTNLRDDIMRI 729
E++D K+ +QA+I+ PT EL +Q + + +L + ++ TT G N++ + ++
Sbjct: 62 EKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKL 119
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 84.2 bits (199), Expect = 3e-15
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 8/119 (6%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 561
F + L E+L + ++G+ P+PIQ IP L+GKDV+A A+ GTGKT + +P+L
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 562 ------EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
V P + ++ALI+ PTRELA+Q + + K+ +R V GG N+ I
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 84.2 bits (199), Expect = 3e-15
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Frame = +1
Query: 334 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 513
P I++ T N F L EL+ + +G+E P+PIQ A+IP AL+G D+LA
Sbjct: 13 PVSDDIRSERKTTIMSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAA 72
Query: 514 AKNGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAKHT 669
A+ GTGKT A+ +P LE++ P ++ L++ PTRELA Q Q K+
Sbjct: 73 AQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNL 132
Query: 670 DIRVMVTTGGTNL 708
+R V GG N+
Sbjct: 133 PLRHTVLFGGMNM 145
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/110 (36%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS--GKDVLARAKNGTGKTGAYCIPVL 561
FEE LK ELL G+++ G+ +PS IQE ++P+ ++ ++++A++++GTGKT A+C+ +L
Sbjct: 40 FEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQSGTGKTAAFCLAML 99
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNL 708
V+P Q L + PT ELALQ Q+ ++ + D+R++ G +
Sbjct: 100 GIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRFCADVRLVYAVRGNRI 149
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/116 (32%), Positives = 71/116 (61%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N+F+++ + L + +G +P+ IQ+ IP AL G++++ ++ GTGKT AY +P+L
Sbjct: 2 NQFQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPML 61
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + + QALI+ PT+ELA+Q ++ +L T I V+ GG N++ + ++
Sbjct: 62 TKTEELPEQTQALILAPTQELAMQIVEVAKQLTATTSITVLPLIGGANIKRQVEKL 117
>UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia
intestinalis|Rep: GLP_538_22840_21176 - Giardia lamblia
ATCC 50803
Length = 554
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 409 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP-VLEQVDPKKD 585
+EL I + GWE PSP+Q+A+IP +S +D L A G+GK+GAY IP +L P D
Sbjct: 105 KELQKNISKLGWEVPSPVQQAAIPALMSRRDCLCLAPTGSGKSGAYIIPSILSLGQPGSD 164
Query: 586 TIQALIVVPTRELALQTSQICIELA 660
+ L++VPTRELA Q +++C +LA
Sbjct: 165 GFRVLVLVPTRELADQVARVCNQLA 189
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 83.8 bits (198), Expect = 4e-15
Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
++FE+F L ELL + +KG+ +P+ IQ +IP A+ DVL A GTGKT A+ +P L
Sbjct: 4 SQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPAL 63
Query: 562 EQV----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ + K + L++ PTRELA+Q ++ ELA+ T + + TGG
Sbjct: 64 QHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGG 113
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 83.4 bits (197), Expect = 5e-15
Identities = 41/108 (37%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Frame = +1
Query: 409 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDT 588
+++L G+ G+++PSPIQ +IP+ G D++ RAK+GTGKT +CI LE +D +
Sbjct: 5 QKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDIDISS 64
Query: 589 IQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNLRDDIMRI 729
+Q LI+ PTRE+A+Q +Q+ + + D++V V GG + +D ++
Sbjct: 65 VQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKV 112
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 83.4 bits (197), Expect = 5e-15
Identities = 39/89 (43%), Positives = 59/89 (66%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A++GTGKT + I +L
Sbjct: 35 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 94
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQIC 648
+Q++ + QAL++ PTRELA Q C
Sbjct: 95 QQLEIDQKETQALVLAPTRELAQQWRSSC 123
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 83.4 bits (197), Expect = 5e-15
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N F E L L + + G+ P+PIQ+ +IP L G+DVLA A+ GTGKT AY +P++
Sbjct: 3 NTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLI 62
Query: 562 EQV--DPKKDTI----QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+ + +++T +ALI+ PTRELA Q + A+HT++ ++ GGT++R
Sbjct: 63 QMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIR 118
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 83.4 bits (197), Expect = 5e-15
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
EF E L + L + + + KP+ +Q +IP L+GKD++ AK G+GKT A+ +P+L
Sbjct: 2 EFSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLH 61
Query: 565 QV--DPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ DP+ +T +ALI++PTRELALQT + + A +T I+V + GG + + +
Sbjct: 62 KFLNDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATV 119
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 83.4 bits (197), Expect = 5e-15
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +1
Query: 358 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 537
+D DT F L E+L + + G+ P+PIQ A+IP L +DV+ A+ GTGKT
Sbjct: 37 ADEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 538 GAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGT 702
A+ +P+L VD + +QAL++ PTRELA+Q++Q + A T + V+ GG+
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGS 152
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 83.4 bits (197), Expect = 5e-15
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = +1
Query: 376 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 555
+G FE L + I +G+ P+PIQ +IP+ L G+DV+A ++ G+GKT A+ IP
Sbjct: 297 KGGGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIP 356
Query: 556 VLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
++ ++ + +ALIVVPTRELALQ + + K TD+ + GG L
Sbjct: 357 LINKLQNHSRIVGARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGL 409
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 83.4 bits (197), Expect = 5e-15
Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 2/159 (1%)
Frame = +1
Query: 226 NRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCL 405
N+ S+ + + + E + DD+G + ++++K + + +++ L
Sbjct: 141 NKASNDKVLKMAKEKLDNESEHEDDDMGTQINQNA---NKKLKEQKLNKKKKKTWQDLGL 197
Query: 406 KRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPK 579
+ LL + E +E P+ IQ +IP AL GKD+LA + G+GKT A+ IP+L++ P
Sbjct: 198 IKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQKFYRSPF 257
Query: 580 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 696
+ +ALIV PTRELA Q ++ +L K+T +R + G
Sbjct: 258 TNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIG 296
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F F L + + + PSPIQ +IP+ L G+D +A A+ GTGKT A+ +P+L
Sbjct: 6 SNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPIL 65
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGG 699
+ + P+ T QALI+ PTRELA+Q ++ L+K+ ++ + V GG
Sbjct: 66 QNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGG 112
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 83.0 bits (196), Expect = 7e-15
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Frame = +1
Query: 367 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
T N FE L L+ + G+E+P+PIQ A++P L GKD+L A GTGKT A+
Sbjct: 31 TSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAF 90
Query: 547 CIPVLEQVDPKKD---TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+P+L+++ P T AL++VPTRELA+Q ++ + I V+ GG
Sbjct: 91 SLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGG 144
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 83.0 bits (196), Expect = 7e-15
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE F ++ G+ G+++P+PIQ +IP ++G DV+ A+ GTGKT AY +P++++
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQK 62
Query: 568 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + ++ L++ PTRELA Q S L + IR GG N+ I R+
Sbjct: 63 MLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRL 117
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 83.0 bits (196), Expect = 7e-15
Identities = 44/111 (39%), Positives = 60/111 (54%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F L ++ + EKG+E + IQE SI L G+D+L + G+GKTGA+ IP++E
Sbjct: 57 FASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEH 116
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
ALIV PTRELALQ Q L+K + GGTN+ D+
Sbjct: 117 ALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDM 167
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 82.6 bits (195), Expect = 9e-15
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +1
Query: 346 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 525
R +T DV +FE L R +L G+ G+E+PSP+Q +IP+ G D++ +AK+G
Sbjct: 51 RTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSG 110
Query: 526 TGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA-KHTDIRVMVTTGGT 702
TGKT + L+ + + + Q LI+ PTRE+A+Q + + K + V GGT
Sbjct: 111 TGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 170
Query: 703 NLRDDIMRI 729
L D R+
Sbjct: 171 PLSQDKTRL 179
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 82.6 bits (195), Expect = 9e-15
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FEE L LL + + G ++PS IQ +IP L GKDVL ++ G+GKT A+ +P+L++
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 568 VDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ +ALI+ PTRELA QT+ +C +L + ++ V GGT+ + +
Sbjct: 82 LTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSV 137
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 82.6 bits (195), Expect = 9e-15
Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 564
FE L + LL G+ + G+E P+ IQ+ SIPI L D + A+ GTGKT A+ +P+L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRI 729
+D +QALI+ PTRELA Q +++KH + V+ GG N+ + I I
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDI 130
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 82.6 bits (195), Expect = 9e-15
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+FE + L + + E G+ +P+ IQ SIP L+G+DVLA A+ GTGKT A+ IPVL
Sbjct: 2 KFESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLN 61
Query: 565 Q-VDPKKD---TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
++ KK I L++ PTRELA+Q S++ ++ +T +R + TGG
Sbjct: 62 TLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGG 110
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 82.6 bits (195), Expect = 9e-15
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F L LL + E + +P+P+Q A+IP+AL G+D+ A+ G+GKT A+ +P+L +
Sbjct: 184 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 243
Query: 568 -VDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
VD K + I+ALI++PTRELA QT + ++ T I+ + TGG + ++
Sbjct: 244 LVDLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKE 295
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 82.6 bits (195), Expect = 9e-15
Identities = 37/97 (38%), Positives = 62/97 (63%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ +K +LL GI+ +EKPS +Q+ ++ + G DV+A+A++GTGKT + + V +
Sbjct: 278 FDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMFALTVYQM 337
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 678
VD +QALI PTRELA QT ++ + + +I+
Sbjct: 338 VDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQ 374
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 82.6 bits (195), Expect = 9e-15
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +1
Query: 376 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 555
+G F+ F L++ LL I ++G+ P+PIQ +IP L G DV+A A+ G+GKT A+ IP
Sbjct: 20 KGGGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIP 79
Query: 556 VLE--QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+L + K I+ L++ PTREL+LQ + L K D+R GG ++
Sbjct: 80 MLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSM 132
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 82.6 bits (195), Expect = 9e-15
Identities = 46/163 (28%), Positives = 87/163 (53%)
Frame = +1
Query: 220 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEF 399
++ I ++NH ++I+ G +K+ D+ + + + + T++ + + FE+
Sbjct: 104 SDYNIINNNH--DNINFIHGNKNKNHDNSFHNNDDVKNGEVKNLVTNEEREKQNVTFEDL 161
Query: 400 CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPK 579
+ E+L I E GW+KP+ IQ +P A KD++ ++ G+GKT + IP+L+ +
Sbjct: 162 NICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQDLKVN 221
Query: 580 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
K + AL++ PTREL +Q SQ L + I + GG ++
Sbjct: 222 KQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDI 264
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 82.6 bits (195), Expect = 9e-15
Identities = 41/106 (38%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F++ + E+ + + G+E+ SPIQ +IP L+ KDV +A+ GTGKT A+ IP+LE
Sbjct: 5 KFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLE 64
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGG 699
+D + + +QA+I+ PTRELA+Q ++ +L+ + I V+ GG
Sbjct: 65 NIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGG 110
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/116 (34%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ L + L+ G+ ++G KP+ IQ +IP+AL KDV+ ++ G+GKT AY +P+ ++
Sbjct: 5 FDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLPIFQK 64
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVT--TGGTNLRDDIMRI 729
+D K +QA+I+ PT ELA+Q ++ L+ ++ + V T G N++ I ++
Sbjct: 65 IDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/75 (48%), Positives = 54/75 (72%)
Frame = +1
Query: 415 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQ 594
+L I G+E+PSPIQ +IP+ L+G D++ +A+ GTGKT A+ +P+L ++DP + Q
Sbjct: 34 VLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQ 93
Query: 595 ALIVVPTRELALQTS 639
LI+ PTRELALQ +
Sbjct: 94 LLILAPTRELALQVA 108
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L+ ELL + G+E+P+PIQ ++P ++G+D+L +A GTGKT A+ +P+L +
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 568 VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ + QAL++VPTRELA+Q S+ + RV+ GG
Sbjct: 119 LTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGG 165
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L LL + G+E P+PIQ +I L G DVL A+ GTGKT A+ +P+L +
Sbjct: 7 FADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSR 66
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDI 720
+D K+ QAL++ PTRELA+Q ++ A+ D V+ GG ++R+ +
Sbjct: 67 IDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQL 118
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +1
Query: 352 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 531
+TSDV + F L+R+++ G+ + + P+ IQ A+IPIAL+G D+L ++K+GTG
Sbjct: 15 RTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTG 74
Query: 532 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA-KHTDIRVMVTTGGTNL 708
KT Y + L+ + L+++PTRELALQ I L K +V GGT++
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDV 134
Query: 709 RDD 717
D
Sbjct: 135 TRD 137
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F EF L ELL I + +P+PIQ A+IP AL GKD++ A+ G+GKT A+ IP+L+
Sbjct: 100 FTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQT 159
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD---DIMR 726
+ AL++ PTRELA Q + L +R + GG ++ + D+MR
Sbjct: 160 LYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMR 215
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 82.2 bits (194), Expect = 1e-14
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Frame = +1
Query: 244 NHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLM 423
+H N Q + ++ K V +S ++ +I +++T F +F L ++ L
Sbjct: 28 SHRQNKKKQLRKQLKKPEWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLK 82
Query: 424 GIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTI 591
G+ E + + IQ+ +I +AL GKDVL AK G+GKT A+ +PVLE + D +
Sbjct: 83 GLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGL 142
Query: 592 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
LI+ PTRELA QT ++ ++ K+ D + GG +L+ + RI
Sbjct: 143 GVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 81.8 bits (193), Expect = 2e-14
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FEE L +LL I E+ + KP+PIQ +IP L KDVLA A GTGKT A+ +P L+
Sbjct: 3 FEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQF 62
Query: 568 V--DPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ DP+ + LI+ PTRELA Q ++ +L H V TGG
Sbjct: 63 LLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGG 109
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 81.8 bits (193), Expect = 2e-14
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L + I + G+E P+ IQE +IPIAL G D+LA A GTGKT A+C P ++
Sbjct: 19 FAELDLDFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQH 78
Query: 568 V---DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 702
+ D + T + LI+ P+RELA Q + +L KHT I+ + GGT
Sbjct: 79 ILDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTKHTRIQSHLIIGGT 127
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 81.8 bits (193), Expect = 2e-14
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE L EL I +G+ P+PIQ +IP L+G+D++A +K G+GKT A+ IP++ +
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 568 VDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ I+ LI++PTRELALQ + + L K +DI+ + GG
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGG 117
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 81.8 bits (193), Expect = 2e-14
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Frame = +1
Query: 280 EVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFC---LKRELLMGIFEKGWEK 450
E D D K K+ + T + FE F L EL+ + K
Sbjct: 44 ESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLNYSK 103
Query: 451 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 630
P+PIQ +IP AL G D++ A+ G+GKT A+ IP+L ++ ++ A I+ PTRELA
Sbjct: 104 PTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQ 163
Query: 631 QTSQICIELAKHTDIRVMVTTGGTNLRD---DIMR 726
Q + L +R GG N+ D D+MR
Sbjct: 164 QIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMR 198
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 81.8 bits (193), Expect = 2e-14
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +1
Query: 346 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 525
R +T DV +FE L R +L G+ G+E+PSP+Q +IP+ G D++ +AK+G
Sbjct: 50 RTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSG 109
Query: 526 TGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA-KHTDIRVMVTTGGT 702
TGKT + L+ + + + Q LI+ PTRE+A+Q + + K + V GGT
Sbjct: 110 TGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169
Query: 703 NLRDDIMRI 729
L D R+
Sbjct: 170 PLSQDKTRL 178
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/107 (40%), Positives = 62/107 (57%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L E L + G+E P+PIQ +IP AL+GKDV+ A GTGKT A+ +P++++
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDR 65
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+ K T +AL++ PTRELALQ + +R V GG +
Sbjct: 66 LAGKPGT-RALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGM 111
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPV 558
N+FE+ L LL I + G+E P+ +QE +IP+ L D++A A+ GTGKT A+ PV
Sbjct: 2 NKFEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPV 61
Query: 559 LEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRD 714
++++D QALI+ PTREL LQ + +K+ I V+ GG ++ +
Sbjct: 62 IQKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITE 114
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N F++ L + L G+ E G+ KP+ IQ +I + L+GKD+L A+ G+GKT A+ IP+L
Sbjct: 51 NSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPIL 110
Query: 562 EQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
E++ K+ D + AL++ PTRELA Q + + +H + + GG +L+
Sbjct: 111 ERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLK 164
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L+ LL + E G+E PSPIQ IP L+G D+L A+ GTGKT A+ +P+L++
Sbjct: 46 FAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDR 105
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNL 708
+D Q L++ PTRELA+Q ++ AK+ V+ GG ++
Sbjct: 106 LDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSM 153
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/107 (37%), Positives = 65/107 (60%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ + L L G+ + GWE + +Q ++PIA G DV+ +A+ G+GKT A+ +P+LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
P +QAL++ PTRELA Q +Q L + + ++ GGT+L
Sbjct: 67 CQP-SGKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDL 112
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 561
F +F L ++ I +G+ +P+PIQ +IP+ ++G DV+ A+ GTGKT + +P+L
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 562 ------EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 723
E P + ++ALI+ PTRELA Q + AK T +R V GG ++ I
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQ 141
Query: 724 RI 729
+
Sbjct: 142 TL 143
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 81.0 bits (191), Expect = 3e-14
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Frame = +1
Query: 370 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 549
DT+ + F L L + G+E +PIQ +IP+ L G+DV+ A+ GTGKT A+
Sbjct: 5 DTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFA 64
Query: 550 IPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDI 720
+P+L +D K + QAL++ PTRELA Q ++ + +R++ GG ++R +
Sbjct: 65 LPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQL 122
>UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-PA
- Drosophila melanogaster (Fruit fly)
Length = 826
Score = 81.0 bits (191), Expect = 3e-14
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Frame = +1
Query: 337 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 516
+D + K +++ T +F +F L ++ + E + P+ +Q SI AL GKDVL A
Sbjct: 57 QDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAA 116
Query: 517 KNGTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVM 684
G+GKT A+ IPVLE + K D + A+I+ PTRELA Q + ++ KH D
Sbjct: 117 ITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAG 176
Query: 685 VTTGGTNLRDDIMRI 729
+ GG NL+ + R+
Sbjct: 177 LIIGGKNLKFERTRM 191
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/106 (35%), Positives = 65/106 (61%)
Frame = +1
Query: 412 ELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTI 591
+L+ I++ G+E PSP+Q+ SIP + G+ + A+ G+GKT A+ I +L V+P+K
Sbjct: 13 DLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSIC 72
Query: 592 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
QA+I+ PT+EL+ QT ++ L + IR + T G ++ +I
Sbjct: 73 QAVIISPTKELSNQTLEVINTLGTRSGIRGVCLTSGVMAKEQFEKI 118
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 81.0 bits (191), Expect = 3e-14
Identities = 45/111 (40%), Positives = 66/111 (59%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
+E LK EL+ I + GWEKPSPIQ+ +I I GK+++ +++NG+GKT + I L +
Sbjct: 22 WESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSIGTLAR 81
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
+ T + +IV PTRELA+QT L +T R V GG +L D+
Sbjct: 82 LRLTSKTTELIIVSPTRELAIQTENTLKSLGANT--RACV--GGNSLGADV 128
>UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56; n=1; Danio rerio|Rep: DEAD
(Asp-Glu-Ala-Asp) box polypeptide 56 - Danio rerio
Length = 344
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/97 (41%), Positives = 64/97 (65%), Gaps = 7/97 (7%)
Frame = +1
Query: 439 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDT-----IQALI 603
GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY +P++++V K T ++A++
Sbjct: 9 GWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPLIQRVLTSKQTVREQAVRAVV 68
Query: 604 VVPTRELALQTSQICIELAKH--TDIRVMVTTGGTNL 708
+VPT+EL Q + +L + D+RV +G +L
Sbjct: 69 LVPTKELGQQVQTMIRQLTAYCSRDVRVADISGKADL 105
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = +1
Query: 436 KGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVP 612
KG+++PSPIQE +IP+ LS D++ +A+ GTGKT A+ +P++++++P QALI+ P
Sbjct: 20 KGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCP 79
Query: 613 TRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
TRELA+Q ++ K I + GG + D
Sbjct: 80 TRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMD 113
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 80.6 bits (190), Expect = 4e-14
Identities = 41/118 (34%), Positives = 73/118 (61%), Gaps = 7/118 (5%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE L+ E++ + + + KP+PIQ +IPI L+G+D++A A+ G+GKT A+ +P++
Sbjct: 176 FERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHH 235
Query: 568 VDPKKDTIQ-------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
+ K+D+++ +IV PTRELA+Q + A T ++V V+ GGT ++ +
Sbjct: 236 LLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQL 293
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 80.6 bits (190), Expect = 4e-14
Identities = 42/110 (38%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIPVL 561
FEE LK ELL GI+ G+ +PS IQE ++P+ L+ ++++A++++GTGKT A+ + +L
Sbjct: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNL 708
+V+ + Q L + PT ELALQT ++ ++ K D++VM G +
Sbjct: 159 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRI 208
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/107 (34%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIPVL 561
F+E L +L+ GI G++KPS IQE ++P+ LS ++++ ++++GTGKT A+ + +L
Sbjct: 150 FKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNML 209
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 702
+VDP T QA+ + P+RELA Q ++ ++ + T + + G+
Sbjct: 210 SRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGS 256
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 80.2 bits (189), Expect = 5e-14
Identities = 40/116 (34%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++F + + + EKG+E+P+ +QE IPI GK V+ +++ G+GKT + +P++++
Sbjct: 4 FKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPLMDK 63
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT--DIRVMVTTGGTNLRDDIMRI 729
V P D +Q +I P+RELA Q Q +LA+ + +IRV GGT+ + + ++
Sbjct: 64 VKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKL 119
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 80.2 bits (189), Expect = 5e-14
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Frame = +1
Query: 259 SISQTKGEVDKSIDDVGWKSKLKIPPKDR--RIKTSD--VTDTRGN------EFEEFCLK 408
S S +DK DD W K KDR RI D ++ GN + E +
Sbjct: 216 SYSSRYDSLDKRFDDKHWSEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRESGIP 275
Query: 409 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--PKK 582
+L I E G+++PSPIQ +IPI L +D++ A+ G+GKT ++ IP+L + PK
Sbjct: 276 ASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYISKLPKL 335
Query: 583 DT------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
D QALI+VPTRELA Q + A +R + GG ++ D
Sbjct: 336 DEHTKALGPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMND 385
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 80.2 bits (189), Expect = 5e-14
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +1
Query: 346 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 525
R +T DV + G EF L + +L G+ G+++PSPIQ +IP+ G D++ +AK+G
Sbjct: 14 RTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSG 73
Query: 526 TGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGT 702
TGKT + L+ + + T Q L++ PTRE+A+Q + + + + + V GG
Sbjct: 74 TGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGR 133
Query: 703 NLRDD 717
+ D
Sbjct: 134 PISQD 138
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 80.2 bits (189), Expect = 5e-14
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F L ++ L G+ E + + IQ+ +I +AL GKDVL AK G+GKT A+ +PVLE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 568 VD----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ D + LI+ PTRELA QT ++ ++ K+ D + GG +L+ + RI
Sbjct: 131 LYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/93 (40%), Positives = 62/93 (66%), Gaps = 6/93 (6%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F + L LL + ++ ++KP+ +Q +IP+AL G+DVLA+AK G+GKT AY +P+L
Sbjct: 43 SSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPIL 102
Query: 562 E------QVDPKKDTIQALIVVPTRELALQTSQ 642
+ Q++P I +LI+VPTREL +Q ++
Sbjct: 103 QAVLKRKQINPGATYISSLILVPTRELTVQVTK 135
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 79.8 bits (188), Expect = 6e-14
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Frame = +1
Query: 349 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 528
+K ++T F + LL G+ G +P PIQ +IP L G+D+L A+ G+
Sbjct: 76 LKEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGS 135
Query: 529 GKTGAYCIPVLEQV----DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT 693
GKT A+ +P+L+++ D ++ T +ALI+ PTRELA+Q Q ++K I +
Sbjct: 136 GKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVL 195
Query: 694 GGTNLRDDIMRI 729
GG + I RI
Sbjct: 196 GGVSKLSQIKRI 207
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 79.8 bits (188), Expect = 6e-14
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F LL + G+ KP+PIQ +IP+ +S D++A A+ GTGKT AY +P+L +
Sbjct: 3 FNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILHK 62
Query: 568 -VDPKKDTIQALIVVPTRELALQTSQ 642
++ D++ L++VPTRELA+Q Q
Sbjct: 63 IIESNTDSLDTLVLVPTRELAIQIDQ 88
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 79.8 bits (188), Expect = 6e-14
Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ F L L + P+PIQE +IP AL+G+D+L A+ GTGKT A+ +P+L
Sbjct: 6 FDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLHH 65
Query: 568 V-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ P T +ALI+ PTRELA+Q ++ +L++ T I V GG ++R I +
Sbjct: 66 LMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 79.8 bits (188), Expect = 6e-14
Identities = 40/108 (37%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F + L ++++ + + G+E P+PIQ+ +IP LSG+DVL +A+ GTGKT A+ +P++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 565 QVD-PKKDTI-QALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGG 699
+D +D Q L++ PTRELA+Q ++ AK+ ++ V GG
Sbjct: 68 NMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L +L I ++G+ +PS IQ +IP L G+DV+A A+ GTGKT + +P+LE
Sbjct: 7 FNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLEI 66
Query: 568 V----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + + + ++AL++ PTRELA Q ++ +H ++ V GG + +M +
Sbjct: 67 LSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMAL 124
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 79.8 bits (188), Expect = 6e-14
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Frame = +1
Query: 451 PSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELA 627
P+ IQE IPI L+ K D++A AK GTGKT A+ +P+L+ +D D IQA+I+ PTREL
Sbjct: 26 PTEIQEKVIPIVLNDKEDIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELG 85
Query: 628 LQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRI 729
Q + I A+HT + + GG ++ I R+
Sbjct: 86 QQIAANLISFAEHTSQVSIATLCGGIPIKPQIERL 120
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 79.8 bits (188), Expect = 6e-14
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F L +L + E ++ P+ IQ+ +IP + GKD+LA A+ GTGKT A+ +P+LE+
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 568 V-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
+ + K+ + L++VPTRELA Q +Q AK + + GG +
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVS 113
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 79.8 bits (188), Expect = 6e-14
Identities = 38/104 (36%), Positives = 59/104 (56%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F L EL + GW+ P+ IQ +P AL G+D++A A+ G+GKT A+ +P+L++
Sbjct: 53 FASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQR 112
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ + ALI+ PTREL LQ SQ + + + V+ GG
Sbjct: 113 LLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGG 156
>UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 591
Score = 79.8 bits (188), Expect = 6e-14
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 337 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 516
K R++ D + E F + +L+ I + G++ P+P+Q +IP+ L G V A A
Sbjct: 125 KGRKVAVPDPIEQFRELAERFNVSNQLIKNIEDCGYKAPTPVQMQAIPVLLEGHPVHACA 184
Query: 517 KNGTGKTGAYCIPVLEQVD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT 693
G+GKT A+ IP++ + P K +AL+V PTRELA QT + + L + ++R V T
Sbjct: 185 PTGSGKTAAFLIPIIHHLQKPMKCGFRALVVCPTRELAKQTQRESLRLCEEINLRTHVIT 244
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +1
Query: 391 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 570
+E+ + LL I + G++ P+PIQ +IP+ L G+++LA A G+GKT A+ IP+L Q+
Sbjct: 167 QEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL 226
Query: 571 -DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRV 681
P +ALI+ PTRELA Q + I++++ T R+
Sbjct: 227 KQPANKGFRALIISPTRELASQIHRELIKISEGTGFRI 264
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 79.8 bits (188), Expect = 6e-14
Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+FE + LK ++ + G+ +P+ IQ+ IP L + V+ +++ GTGKT AY +P+L
Sbjct: 5 KFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLN 64
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELA---KHTDIRVMVTTGGTNLRDDIMRI 729
++DP KD +Q +I PTRELA Q Q +++ + + IR GGT+ + I ++
Sbjct: 65 KIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKL 122
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 79.8 bits (188), Expect = 6e-14
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
Frame = +1
Query: 295 IDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEAS 474
+D+V +++ DR + + FEE L L+ + +KG EKP+ IQ+++
Sbjct: 17 VDEVEKAEEVEEQRNDREQEEEQKEEEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSA 76
Query: 475 IPIALSGKDVLARAKNGTGKTGAYCIPVLEQ------VDPKKDTIQALIVVPTRELALQ 633
IP L GKDV+ARAK G+GKT AY +P+L++ V KK A I+VP+REL Q
Sbjct: 77 IPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSADSVSKKKLAPSAFILVPSRELCQQ 135
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 79.8 bits (188), Expect = 6e-14
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + + +L I + G+E P+ IQ A+IP ++G DV+ A+ GTGKT A+ IP+L +
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 568 VDPKKDTIQALIVVPTRELALQTSQ 642
+D QAL++VPTRELALQ ++
Sbjct: 75 IDITSKVPQALVLVPTRELALQVAE 99
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 79.8 bits (188), Expect = 6e-14
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+FE L + + G+E P+PIQ IP+ L G+D+LA A G+GKT A+ +PV+
Sbjct: 204 DFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVII 263
Query: 565 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRI 729
+ P+ T ALI+ PTRELA+Q + EL + ++ ++ GG L + R+
Sbjct: 264 RALPEDKTPSALILTPTRELAIQIERQAKELMRGLPRMKTVLLVGGLPLPPQLYRL 319
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +1
Query: 391 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 570
+E+ + LL I + G++ P+PIQ +IP+ L G+++LA A G+GKT A+ IP+L Q+
Sbjct: 168 QEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL 227
Query: 571 -DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRV 681
P +ALI+ PTRELA Q + I++++ T R+
Sbjct: 228 KQPANKGFRALIISPTRELASQIHRELIKISEGTGFRI 265
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/98 (39%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIPVL 561
F+E L ELL GI+ ++KPS IQE ++P+ L ++++A++++GTGKT A+ + +L
Sbjct: 94 FDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTML 153
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 675
+V+P+ + QA+ + P+RELA QT ++ E+ K T I
Sbjct: 154 TRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKI 191
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N F E L L + + + P+P+Q +IP+AL GKD+L A+ GTGKT A+ IP++
Sbjct: 2 NSFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLI 61
Query: 562 EQVDPKKDTIQALIVVPTRELALQ-TSQICIELAKHTDIRVMVTTGG 699
++ + + AL++VPTRELA Q T++I L K++ +++ + GG
Sbjct: 62 AKLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGG 108
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 564
F F L L+ + +G+ P+PIQE ++P AL+G+D+L A GTGKT A+ +P+L
Sbjct: 58 FARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLHR 117
Query: 565 ---QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
Q + + T++AL+V PTREL Q + LA+ +R GG + +++
Sbjct: 118 LLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQTVQL 175
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 79.4 bits (187), Expect = 8e-14
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F + L + LL + +KG+ P+PIQ +IP+ +SG+D+L A+ GTGKT A+ +P+L
Sbjct: 66 QFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILH 125
Query: 565 QV-DPKKDT----IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
++ + KK + L++ PTRELA Q ++ + KH + V GG
Sbjct: 126 RLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGG 175
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 79.4 bits (187), Expect = 8e-14
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F+ L +L I E G+ + + +Q+ IP+AL GKD++A A+ GTGKT ++ +PVLE
Sbjct: 23 KFDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLE 82
Query: 565 QVDPK---KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
Q+ + K ++AL++ PTRELA+Q + ++ ++ + GG N+
Sbjct: 83 QLSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANM 133
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 79.4 bits (187), Expect = 8e-14
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L R L+ I G+ P+PIQ ++IP+AL G+D+ A GTGKT AY +P LE+
Sbjct: 159 FYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLER 218
Query: 568 V--DP--KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+ P K + L++VPTREL Q Q+ +L + T I V + GG +++
Sbjct: 219 LLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVK 270
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 79.4 bits (187), Expect = 8e-14
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Frame = +1
Query: 313 KSKLKIPPKDRRIKTSDVTDTRG-NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 489
K+ ++ P + IK S+ FE+ LK ELL GI G+ KPS IQE ++P+ L
Sbjct: 24 KTLVETDPINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLL 83
Query: 490 SG--KDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 663
K+++A++++GTGKT + + +L ++D Q L + PTREL Q +++ I ++K
Sbjct: 84 ENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSK 143
Query: 664 HTDIRVMVTTGGTNLRDDIM 723
+ V +T L DI+
Sbjct: 144 FMN-NVKITCAIKGLSPDIL 162
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 79.4 bits (187), Expect = 8e-14
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L ++ I + G+E+P+PIQ+ IP+ L+G DV +A GTGKT A+ IP +E
Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIEL 65
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDI 720
P +Q +++ P+RELA+Q +LA H I ++ GG + I
Sbjct: 66 CQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQI 117
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 79.4 bits (187), Expect = 8e-14
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F LK E+L I + G+E PS +Q IP A+ G D+L +AK+G GKT + + L+Q
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 568 VDPK-KDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDD 717
++P +T L++ TRELA Q S+ +K+ ++V V GG ++ D
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKD 154
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 79.4 bits (187), Expect = 8e-14
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Frame = +1
Query: 334 PKDRRIK---TSDVTDTRGNEFEEFCLKRELLMGIF-EKGWEKPSPIQEASIPIALSG-- 495
P+D IK + D T + FE+ L EL+ G++ E +EKPS IQ S+P+ ++
Sbjct: 72 PEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPH 131
Query: 496 KDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 675
K ++A+A NG+GKT + + +L +VDP QAL + PTRELA Q ++ ++ K T I
Sbjct: 132 KHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGI 191
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F L E L + E G+ + +P+Q A++P LSG DV A+AK G+GKT A+ I +L++
Sbjct: 6 FSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLDR 65
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGG 699
+ T QAL++ PTRELA Q S+ LA+ +I+++ GG
Sbjct: 66 IVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGG 110
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 79.0 bits (186), Expect = 1e-13
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ F L + +L GI G+ K + +Q+ +IP AL +D++ A+ G+GKT A+ +P+L+
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 568 VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+ K +ALI+VPTRELA Q + C LAK T I+ + TGG +
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFK 112
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE+F L + L + E G+ P+PIQE S + +SG+D++ A+ GTGKT AY +P+L+
Sbjct: 4 FEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPLLKL 63
Query: 568 VD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+T + +++VPTREL +Q + +L K+ ++ + GG N+
Sbjct: 64 YKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKYMSVKTLGIYGGVNI 111
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++FCLK EL I E G+E PS +Q ++P A+ G D+LA+AK+G GKT + +LEQ
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQ 97
Query: 568 VDP----KKDTIQALIVVPTRELALQTSQ 642
V+ +K QA+++V RELA Q Q
Sbjct: 98 VEKVPQGQKPYCQAVVLVHARELAYQIEQ 126
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FEE L +E++ I E W P+PIQ SIPI L G D++ AK G+GKT ++ IP L
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKTGSGKTASFLIPALMH 146
Query: 568 VDPKK-----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ ++ D L++ PTRELALQT ++ + + + GG + I ++
Sbjct: 147 ISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQINKL 205
>UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 522
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+E+E+ + + +K W++P+PIQ+ +IP AL GKD+LA+A+ G+GKT AY IP+L
Sbjct: 9 SEWEKLIGPEKRVYDAAKKLWDRPTPIQQTAIPPALQGKDILAKARTGSGKTAAYIIPIL 68
Query: 562 EQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 675
+ P +ALI+VPTREL Q ELA + I
Sbjct: 69 IGLSRSPLPLNFKALILVPTRELCKQVKSQFDELAHYCRI 108
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIF-EKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIPV 558
FE+ L ELL G+ E G+ +PS IQ ++P+ L+ KD++A+A NG+GKT + + +
Sbjct: 102 FEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVLGM 161
Query: 559 LEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 675
L +VDP + QA+ + PTRELA Q + + + K T I
Sbjct: 162 LSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGI 200
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/139 (32%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Frame = +1
Query: 313 KSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS 492
KSK + K + +S +TD E++ L E+ + E G+ K + IQ SIP+ L
Sbjct: 61 KSKEENEEKTKGTTSSFLTDI---EYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLM 117
Query: 493 GKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTIQALIVVPTRELALQTSQICIELA 660
GKD++A+A+ G+GKT A+ IP++E ++ ++ A+I+ PTRELA+QT + ++
Sbjct: 118 GKDIMAKARTGSGKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKIL 177
Query: 661 KHTDIRVMVTTGGTNLRDD 717
H++ + GG++ + +
Sbjct: 178 AHSERTRTLIIGGSSKKKE 196
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Frame = +1
Query: 364 VTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 543
++ T F + L LL + E G+ KP+PIQ SIP+ L G+D+L A+ GTGKT +
Sbjct: 1 MSPTSAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTAS 60
Query: 544 YCIPVLEQV--DPK---KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
+ +P+L ++ P+ K+ + L++ PTREL Q + ++H +RV GG +
Sbjct: 61 FALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVS 119
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE+ + + LL I + G+EKP+ IQ +IP+ L+ DV A A+ GTGKT A+ + +L++
Sbjct: 3 FEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQR 62
Query: 568 V----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+ D K+ ++ L++ PTREL++Q + AK+ I + V GG +L
Sbjct: 63 LRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDL 113
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L +L + G+E PS IQ +IP L G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 11 FAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLSR 70
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDI 720
+D ++ Q L++ PTRELA Q + ++ + + V+ GG R+ +
Sbjct: 71 LDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQL 122
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +1
Query: 451 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV-DPKKDTIQALIVVPTRELA 627
P+P+QE +IP AL G+D+LA A+ GTGKT A+ IP LE + D + +Q LI+VPTRELA
Sbjct: 50 PTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELA 109
Query: 628 LQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+Q + +L + GGT+ R+ I I
Sbjct: 110 MQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSI 143
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/105 (34%), Positives = 62/105 (59%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
+ F ++ L ELL I +E P+ +Q+ IP L KD++ +++ G+GKT A+ IP+
Sbjct: 4 SNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPIC 63
Query: 562 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 696
+ VD ++ QAL++VPTRELA+Q + + + ++V G
Sbjct: 64 QLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYG 108
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L L+ + E G+ P+PIQ +IP L+GK+VLA A+ GTGKT ++ +P+L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 568 -VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
D K ++A+I+ PTRELALQ + + AK+ + M GG +
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVD 112
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
+F + EL + E+ W +P+PIQ+ +IPI +SG +++ A+ G+GKT AY IP +
Sbjct: 487 QFNPQMMLPELFQNVREQNWTEPTPIQKIAIPIVMSGMNLVGIAQTGSGKTAAYLIPAIT 546
Query: 565 QV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 726
V KK LI+ TREL Q + L K+T ++V V GG N R +R
Sbjct: 547 YVINQNKKRGPHVLIMANTRELVKQIQEFGEILTKNTSVKVAVAYGGENNRRQQIR 602
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Frame = +1
Query: 403 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV---D 573
L R+ L + G+EKP+PIQ ++P +SG+DV+ AK G+GKT A+ +P+ +
Sbjct: 604 LTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP 663
Query: 574 PKKDTIQ--ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
P KDT LI+ PTRELA+Q + C K +R + GG +R+ I +
Sbjct: 664 PLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAEL 717
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Frame = +1
Query: 349 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 528
++ + +T+ F E L +L + + GW +P+ IQE +IP+ + GKD+L RA+ G+
Sbjct: 1 MEADEDNETKAKSFYELELDDRILKAVAKLGWLEPTLIQEKTIPLMIEGKDILIRARTGS 60
Query: 529 GKTGAYCIPVLEQVDPKKDT-----IQALIVVPTRELALQTSQICIEL 657
GKT A+ IP+++++ K T I+ LI+ P++EL Q + I L
Sbjct: 61 GKTAAFTIPLIQKILSNKQTRKQQEIKGLIIAPSKELCKQIHDVIISL 108
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L ++ + + G+E PSPIQ A+IP L+G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGG 699
+ Q L++ PTRELA+Q ++ A + RV+ GG
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGG 121
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Frame = +1
Query: 415 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE---QVDP--K 579
LL + + ++ P+P+Q +IP L GKDV+A A+ GTGKT + +P+L+ Q P
Sbjct: 12 LLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVS 71
Query: 580 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + L++VPTRELA Q Q I K D+R + GG ++ +M++
Sbjct: 72 SNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/112 (35%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F L ++ I + G+ SPIQ ++P L+G+D++ +A+ GTGKT A+ I VL++
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 568 ---VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
V P++ +ALI+ PTRELA+Q ++ L+K+ D+ ++ GG +
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVD 211
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 78.2 bits (184), Expect = 2e-13
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
EF E L L + + G+ +PIQ A+IP+AL+G+DVL A+ GTGKT A+ +P+++
Sbjct: 3 EFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLID 62
Query: 565 QV---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 714
++ K +AL++ PTRELA Q + + AK T + + GG + D
Sbjct: 63 KLMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGD 115
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE L E+L + + G P+PIQ+ SIP + G+D+L A+ GTGKTG + +PVL +
Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLHK 62
Query: 568 V-DPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
+ + ++ I +AL++ PTRELA Q Q + AK+ ++ GG +
Sbjct: 63 IAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVD 111
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Frame = +1
Query: 370 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 549
D FEE L+ L+ + + G EKP+ IQE +IP+ L GKDV+ARAK G+GKT AY
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 550 IPVLEQV-----DPKKDTIQALIVVPTRELALQ 633
+P+L+++ K A ++VPTREL Q
Sbjct: 80 LPLLQKLFCESESRNKLAPSAFVLVPTRELCQQ 112
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F+ F +LL I G+ P+PIQ P L+G+DV+A A+ G+GKT + +P++E+
Sbjct: 6 FQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIER 65
Query: 568 VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+ I+ +++ PTRELALQT ++ +LA T++ V TGG++L
Sbjct: 66 LGCSHSQIVGIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSL 115
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 77.8 bits (183), Expect = 3e-13
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
N F F L ++ + + +KP+ IQ IP AL G+D++ +++ GTGKT ++ +P++
Sbjct: 2 NGFSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIV 61
Query: 562 EQVDPKKDTIQALIVVPTRELALQT-SQICIELAKHTD-IRVMVTTGGTNLRDDIMRI 729
+ V+P+ +QA+IV PTRELA Q ++ L K D I+ + TGG + I R+
Sbjct: 62 QNVNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYIKTSLITGGMDRERQIGRV 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,021,772
Number of Sequences: 1657284
Number of extensions: 11146366
Number of successful extensions: 32060
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 29920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31347
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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