Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4n22
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 237 6e-63
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 104 7e-23
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 104 7e-23
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 104 7e-23
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 103 1e-22
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 93 2e-19
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 90 1e-18
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 90 1e-18
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 87 2e-17
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 79 2e-15
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 77 1e-14
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 77 1e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 73 3e-13
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 71 6e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 71 9e-13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 71 9e-13
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 69 3e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 63 2e-10
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 61 7e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 61 7e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 61 7e-10
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 58 6e-09
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 57 1e-08
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 57 1e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 57 1e-08
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 1e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 1e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 1e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 53 2e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 53 2e-07
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 53 2e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 53 2e-07
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 52 3e-07
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 52 3e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 52 6e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 48 7e-06
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 3.4
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 3.4
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 5.9
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 28 5.9
Z73973-6|CAA98268.2| 189|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z71185-13|CAD54125.1| 189|Caenorhabditis elegans Hypothetical p... 28 7.9
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 237 bits (580), Expect = 6e-63
Identities = 105/143 (73%), Positives = 127/143 (88%)
Frame = +1
Query: 301 DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIP 480
D WK+ L +P KDRR KT+DVTDT+G EFE+FCL R+LLMGIFEKGWEKPSPIQEASI
Sbjct: 16 DENWKAGLNLPAKDRRFKTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIG 75
Query: 481 IALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 660
+AL+G+D+LARAKNGTGKTGAYCIPV+E++ P IQA+++VPTRELALQTSQIC+EL+
Sbjct: 76 VALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELS 135
Query: 661 KHTDIRVMVTTGGTNLRDDIMRI 729
KH ++VMVTTGGT+LRDDIMR+
Sbjct: 136 KHIQLKVMVTTGGTDLRDDIMRL 158
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 104 bits (249), Expect = 7e-23
Identities = 46/110 (41%), Positives = 77/110 (70%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ LK ELL GI+ G+EKPS IQ+ +I +GKDV+A+A++GTGKT + + +L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 717
+D + +QAL++ PTRELA Q ++ L ++ ++ ++ GGT++RDD
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDD 140
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 104 bits (249), Expect = 7e-23
Identities = 46/110 (41%), Positives = 77/110 (70%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ LK ELL GI+ G+EKPS IQ+ +I +GKDV+A+A++GTGKT + + +L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 717
+D + +QAL++ PTRELA Q ++ L ++ ++ ++ GGT++RDD
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDD 140
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 104 bits (249), Expect = 7e-23
Identities = 48/114 (42%), Positives = 77/114 (67%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ L+ +LL GI+ G+EKPS IQ+ +IP L +DV+A+A++GTGKT + I VL+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+D + QALI+ PTRELA+Q ++ + L + +++ GGTNL +DI ++
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 103 bits (248), Expect = 1e-22
Identities = 47/114 (41%), Positives = 77/114 (67%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F++ L+ +LL GI+ G+EKPS IQ+ ++P L +DV+A+A++GTGKT + I VL+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 568 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+D + QALI+ PTRELA+Q ++ + L + +++ GGTNL +DI ++
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 92.7 bits (220), Expect = 2e-19
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Frame = +1
Query: 370 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTGKT A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 547 CIPVLEQV--DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLR 711
+P+LE++ PK + L++VPTRELA+Q Q+ +L+ + V + GG +L+
Sbjct: 203 VLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLK 260
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 568 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTI 140
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 568 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTI 140
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 86.6 bits (205), Expect = 2e-17
Identities = 46/127 (36%), Positives = 65/127 (51%)
Frame = +1
Query: 349 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 528
I+ D D + F E + + L GW KPS IQ+A++P AL GKDV+ A+ G+
Sbjct: 33 IEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGS 92
Query: 529 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
GKTGA+ IPVL+ + L++ PTRELA Q Q L + V GG ++
Sbjct: 93 GKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDM 152
Query: 709 RDDIMRI 729
M +
Sbjct: 153 AAQAMAL 159
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 79.4 bits (187), Expect = 2e-15
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +1
Query: 340 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 519
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 27 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 86
Query: 520 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 696
+G GKT + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 87 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 146
Query: 697 GTNLRDDIMRI 729
G ++ D R+
Sbjct: 147 GMAIKKDEERL 157
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 79.4 bits (187), Expect = 2e-15
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +1
Query: 340 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 519
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 27 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 86
Query: 520 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 696
+G GKT + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 87 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 146
Query: 697 GTNLRDDIMRI 729
G ++ D R+
Sbjct: 147 GMAIKKDEERL 157
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 79.4 bits (187), Expect = 2e-15
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +1
Query: 340 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 519
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 26 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 85
Query: 520 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 696
+G GKT + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 86 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 145
Query: 697 GTNLRDDIMRI 729
G ++ D R+
Sbjct: 146 GMAIKKDEERL 156
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 77.4 bits (182), Expect = 1e-14
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +1
Query: 370 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTGKT +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 547 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 702
+ +E +D + IQ +IV PTRE+++Q + ++A T R V GG+
Sbjct: 77 SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 77.4 bits (182), Expect = 1e-14
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +1
Query: 370 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 546
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTGKT +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 547 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 702
+ +E +D + IQ +IV PTRE+++Q + ++A T R V GG+
Sbjct: 77 SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 75.8 bits (178), Expect = 3e-14
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP---- 555
F F + L+ I + +E+P+PIQ +IP ALSG+DVL AK G+GKT AY P
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 556 VLEQVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+++Q D K + A+IVVPTRELA+Q Q + K +I + GG
Sbjct: 327 IMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGG 375
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F +F L +L I E GWEK + +QE+ I +AL K+++ RA+ G+GKTGA+ IP++++
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 568 VDPKKDT------IQALIVVPTRELALQTSQICIELAK 663
+ + T A+I+ PT+EL Q ++ ++L++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQ 188
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 71.3 bits (167), Expect = 6e-13
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FE+F L L G+ + + KP+ IQ +I +L+G DV+ AK G+GKT A IPVLE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 568 VDPKKDT----IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
+ K + + ALI+ PTRELALQT + H + GG+++ + RI
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI 195
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 70.9 bits (166), Expect = 9e-13
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +1
Query: 454 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 633
+P+Q A IP L G D+L A+ GTGKT A+ IP+L+++ I ALI+ PTRELA Q
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQ 172
Query: 634 TSQICIELAKHTDIRVMVTTGGTNL 708
++ L K ++ V GG +L
Sbjct: 173 IAEQFTALGKPITLKCSVIVGGRSL 197
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 70.9 bits (166), Expect = 9e-13
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +1
Query: 454 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 633
+P+Q A IP L G D+L A+ GTGKT A+ IP+L+++ I ALI+ PTRELA Q
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQ 172
Query: 634 TSQICIELAKHTDIRVMVTTGGTNL 708
++ L K ++ V GG +L
Sbjct: 173 IAEQFTALGKPITLKCSVIVGGRSL 197
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 68.9 bits (161), Expect = 3e-12
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Frame = +1
Query: 418 LMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP----VLEQVDPKK 582
+M + +K + KP+ IQ +IP +SG+DV+ AK G+GKT A+ +P +L+Q + ++
Sbjct: 315 MMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEE 374
Query: 583 -DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
D A+I+ PTRELA+QT + + AK ++V T GG + + I
Sbjct: 375 GDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQI 421
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 67.3 bits (157), Expect = 1e-11
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 22/200 (11%)
Frame = +1
Query: 196 RDKFGKMMTENRIS---SSNHVGNSISQTKGEVDKSIDDVGWKSK--LKIPPKDRRIKTS 360
++ F + M ENR + + + K E + DD W+ K ++ +D RI
Sbjct: 226 KNSFYQEMMENRRTVDEKEQEMHRLEKELKKEKKVAHDDRHWRMKELSEMSDRDWRIFRE 285
Query: 361 DVT-DTRGNE-------FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 516
D +G +EE E+ + E G+ +P+PIQ +IPI L +DV+ A
Sbjct: 286 DFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVA 345
Query: 517 KNGTGKTGAYCIPVLEQVD--PKKDTIQ-------ALIVVPTRELALQTSQICIELAKHT 669
+ G+GKT A+ +P+L + PK + + A+I+ PTRELA Q + + K
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 670 DIRVMVTTGGTNLRDDIMRI 729
I+ + GG + D M++
Sbjct: 406 GIKTVSVIGGASREDQGMKL 425
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 64.1 bits (149), Expect = 1e-10
Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Frame = +1
Query: 385 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 564
EF E L ++ ++ K ++KP+ IQ S PIA+SG+D+++ AK G+GKT A+ +P L
Sbjct: 131 EFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALV 189
Query: 565 QVD-----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
+ + + L+++PTRELA Q ++ I+ +++ GG +
Sbjct: 190 HITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGAS 241
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/105 (30%), Positives = 59/105 (56%)
Frame = +1
Query: 403 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK 582
LK ELL GI+ G+EKPS IQ++++ +GKDV +++ G+GKT I +L+ +D +
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 583 DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 717
+Q +++ P R +A + + L ++ ++ T +D
Sbjct: 63 AHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNATCLGFDTTAEND 107
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 61.7 bits (143), Expect = 5e-10
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Frame = +1
Query: 415 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE---QVDPKKD 585
LL + G+ + IQ SI L GKDVLA AK G+GKT A+ +P +E +++ K+
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 586 TIQALIVV-PTRELALQTSQICIELAKHTDIRVMVTTGGTN 705
+I+V PTREL++QT + EL + +++ + GG+N
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSN 179
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 61.3 bits (142), Expect = 7e-10
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 16/130 (12%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 568 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 699
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260
Query: 700 TNLRDDIMRI 729
N RD + R+
Sbjct: 261 ENYRDQVNRL 270
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 61.3 bits (142), Expect = 7e-10
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 16/130 (12%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 568 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 699
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 185 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 244
Query: 700 TNLRDDIMRI 729
N RD + R+
Sbjct: 245 ENYRDQVNRL 254
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 61.3 bits (142), Expect = 7e-10
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 16/130 (12%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 568 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 699
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 182 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 241
Query: 700 TNLRDDIMRI 729
N RD + R+
Sbjct: 242 ENYRDQVNRL 251
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Frame = +1
Query: 232 ISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGN---EFEEFC 402
++S V +S ++ EV++++ DV + + + R + D N F +
Sbjct: 73 LASRKRVHDSDGDSENEVEETVGDVEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSS 132
Query: 403 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV---- 570
+ LL + E +PSPIQ SIP ++VLA A G+GKT A+ +PV++++
Sbjct: 133 MSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELK 192
Query: 571 ------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 675
+ A+++ PTRELA QT ++ +T I
Sbjct: 193 QRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSI 233
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 555
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 556 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNL 708
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+
Sbjct: 269 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 555
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 556 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNL 708
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+
Sbjct: 294 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 555
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 556 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNL 708
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+
Sbjct: 678 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 58.0 bits (134), Expect = 6e-09
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Frame = +1
Query: 382 NEFEEFCLKRELLMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 558
N FE+ +MG K G+EKPSPIQ P+ LSG+D + ++ G+GKT A+ +P
Sbjct: 83 NSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPA 142
Query: 559 LEQVD------PKKDTIQ-----ALIVVPTRELALQ 633
L +D K D Q L++ PTRELA Q
Sbjct: 143 LLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQ 178
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 57.2 bits (132), Expect = 1e-08
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Frame = +1
Query: 196 RDKFGKMMTENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDT 375
+++ K + SS+ N+ T + + G ++ PK + + S TD
Sbjct: 94 KERLAKRKQKEAESSAKKSENATETTTEKPKEQKKRKGGENGDTGKPKKSKKEASKKTDI 153
Query: 376 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCI 552
+ + + L E+L I + G+ +P+ IQ A +P A+ + DVL A+ G+GKT A+ I
Sbjct: 154 SAWK-QFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGI 212
Query: 553 P----VLEQVDPKKDT-------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
P +LE D ++T +ALIV PTREL +Q + L T + GG
Sbjct: 213 PLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 57.2 bits (132), Expect = 1e-08
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 17/131 (12%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + L + I G+++P+P+Q+ SIP G+D+++ A+ G+GKT A+ +P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 568 V----------------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ KK AL++ PTREL+LQ + A T I + GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 700 -TNLRDDIMRI 729
N +D I ++
Sbjct: 288 RENYKDQIHKL 298
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + + + + + G+ + +PIQ+ ++P+ GKD+LA A+ G+GKT A+ +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 568 VDPKKDT---------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+ +KD + +I+ PTRELA Q + + + + + GG N+
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F + + + + + G+ + +PIQ+ ++P+ GKD+LA A+ G+GKT A+ +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 568 VDPKKDT---------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 708
+ +KD + +I+ PTRELA Q + + + + + GG N+
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 568 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ D +T + +I+ PTRELA Q + A T + + GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 568 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ D +T + +I+ PTRELA Q + A T + + GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 568 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ D +T + +I+ PTRELA Q + A T + + GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ + D A +I+ PTREL Q + A T + + GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ + D A +I+ PTREL Q + A T + + GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
FEEF + EL + W P+ +Q +IP L G D L A+ G+GKTGA+ +P+ +
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQI 63
Query: 568 V 570
V
Sbjct: 64 V 64
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +1
Query: 388 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 567
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
+ + D A +I+ PTREL Q + A T + + GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Frame = +1
Query: 448 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP----VLEQVDPKKDTI------QA 597
+P+PIQ AS + G DV+A A G+GKT A+ IP ++E+ + +D +
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRL 817
Query: 598 LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
LIV PTREL QT +L T ++ + GG + ++ +
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHL 861
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Frame = +1
Query: 448 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP----VLEQVDPKKDTI------QA 597
+P+PIQ AS + G DV+A A G+GKT A+ IP ++E+ + +D +
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRL 817
Query: 598 LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 729
LIV PTREL QT +L T ++ + GG + ++ +
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHL 861
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Frame = +1
Query: 460 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV----------DPKKDTIQALIVV 609
IQ A IP L G DVL +A+ GKT A+ +P+++++ + D ALI+
Sbjct: 407 IQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILA 466
Query: 610 PTRELALQTSQICIELAKHTDIRVMVTTG 696
PTRELA Q + ++TDI V+++ G
Sbjct: 467 PTRELAAQIHEALRTYCQNTDIIVLLSYG 495
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 51.6 bits (118), Expect = 6e-07
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Frame = +1
Query: 433 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV----LEQVDP----KKDT 588
+KG P+ IQ IP+ALSG+D++ A G+GKT + +P+ LEQ + +
Sbjct: 207 QKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEG 266
Query: 589 IQALIVVPTRELALQTSQICIEL 657
LI+VP+RELA Q + IE+
Sbjct: 267 PFGLIIVPSRELARQIFDLIIEM 289
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 418 LMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK---DT 588
L+ +F+K ++ + +Q S L+ DV+ + G+GKT A+ +P++ + K
Sbjct: 21 LLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPAD 80
Query: 589 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 720
I ALI+ P+REL Q + A+ ++ V TGG + +I
Sbjct: 81 IGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNI 124
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 48.0 bits (109), Expect = 7e-06
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Frame = +1
Query: 421 MGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIP----VLEQVDPKKD 585
M IF + +P+ IQ A +P A+ + DVL A+ G+GKT A+ IP +LE D ++
Sbjct: 1 MLIFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQE 60
Query: 586 T-------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 699
T +ALIV PTREL +Q + L T + GG
Sbjct: 61 TESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 451 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTI-QALIVVPTRELA 627
PS E P L +DV A G+GKT Y +PVL V K I QA+I+VP + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 628 LQTSQICIELAKHTDIRVMVTTGGTN 705
Q + + +V+ G N
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGAN 227
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 445 EKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
EK P+Q A+I +S +D + G GK+ Y +P L
Sbjct: 85 EKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 445 EKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 561
EK P+Q A+I +S +D + G GK+ Y +P L
Sbjct: 108 EKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 702 CASCSNHYTNVCVFCQFN 649
CA C NH ++C+ CQ N
Sbjct: 44 CAICRNHIMDLCIECQAN 61
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 433 EKGWEKPSPIQ-EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVV 609
E G++ +PIQ + + S ++V+ A NG+GKT + VL + + +A+ +
Sbjct: 1316 ESGFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEA-KAVYIT 1374
Query: 610 PTRELA 627
P ++A
Sbjct: 1375 PMEDMA 1380
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 702 CASCSNHYTNVCVFCQFN 649
CA C NH ++C+ CQ N
Sbjct: 35 CAICRNHIMDLCIECQAN 52
>Z73973-6|CAA98268.2| 189|Caenorhabditis elegans Hypothetical
protein F25D1.3 protein.
Length = 189
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 442 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 570
W+ QE+ P ++ L R G+ TGA+C+P++ +V
Sbjct: 98 WDSRVNYQESREPKLIAESVCLCRKSRGS--TGAFCMPIVRKV 138
>Z71185-13|CAD54125.1| 189|Caenorhabditis elegans Hypothetical
protein F25D1.3 protein.
Length = 189
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 442 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 570
W+ QE+ P ++ L R G+ TGA+C+P++ +V
Sbjct: 98 WDSRVNYQESREPKLIAESVCLCRKSRGS--TGAFCMPIVRKV 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,508,958
Number of Sequences: 27780
Number of extensions: 277202
Number of successful extensions: 746
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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