Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4n21
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical ... 74 7e-14
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 73 2e-13
Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 34 0.072
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 34 0.072
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 34 0.072
AF078792-4|AAN84813.1| 261|Caenorhabditis elegans Hypothetical ... 33 0.13
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 30 1.2
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 30 1.2
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 29 2.7
Z54218-2|CAA90956.1| 352|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93383-9|CAB07630.1| 281|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL021566-2|CAA16502.1| 283|Caenorhabditis elegans Hypothetical ... 28 4.8
Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical pr... 27 8.3
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 27 8.3
U23452-11|AAK31548.1| 334|Caenorhabditis elegans Hypothetical p... 27 8.3
>AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical
protein Y40D12A.1a protein.
Length = 635
Score = 74.1 bits (174), Expect = 7e-14
Identities = 39/113 (34%), Positives = 56/113 (49%)
Frame = +3
Query: 9 GPDKSGDVFDKXVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILI 188
GP GD+ + I K DLV ADGS + G+E E E + LI E ++ L
Sbjct: 191 GPSDDGDIEKFTEEYLIKQKLAGTFDLVTADGSTNTQGKEGEIESIVSSLISAEVEVALK 250
Query: 189 CLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLIC 347
LR G +LK + T ++N ++F KP +SRP +SERY++C
Sbjct: 251 LLRRNGRLILKTYRFCAKSTRDVMNLLADNFSSIKAIKPMASRPGSSERYIVC 303
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Frame = +3
Query: 9 GPDKSGDVFDKXVV--FEISIKCGNA---CDLVLADGSVDVNGRENEQERLNFDLIMCET 173
G +GDV D + E I G + L++ADG V G+EN QE L+ L +C+
Sbjct: 344 GTKDNGDVMDPVNIDSLEAHISRGTSGLGVHLMMADGGFSVEGQENIQEILSKRLYLCQL 403
Query: 174 QLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLIC 347
+ L +R GGN K+FD F ++ ++ ++ L+KP +SRPANSERY+ C
Sbjct: 404 LVSLCIVREGGNFFCKLFDIFTPFSVGLIYLMRVCYQSVSLHKPHTSRPANSERYITC 461
>Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical
protein R74.7 protein.
Length = 337
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/94 (29%), Positives = 49/94 (52%)
Frame = +3
Query: 72 GNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTI 251
G D+V+ DG+ DV G + E + +LI+ + L+ GGN + K+F + +
Sbjct: 108 GEKSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKEGGNFLAKIFRSRNSSLL 167
Query: 252 QMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 353
K +F+K L KP SSR ++ E +++C +
Sbjct: 168 YAQMK--KYFKKVYLAKPRSSRQSSCEAFVLCLD 199
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 34.3 bits (75), Expect = 0.072
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +3
Query: 78 ACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQM 257
+ D VL DG+ +V L + +L LR GG V KVF + ++ +
Sbjct: 110 SADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCL-- 167
Query: 258 LNKFVNHFEKWVLYKPPSSRPANSERYLIC 347
+ F F++ ++KP +SR ++E +++C
Sbjct: 168 IRVFEKLFKRVHVWKPAASRLESAEIFVVC 197
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 34.3 bits (75), Expect = 0.072
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +3
Query: 78 ACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQM 257
+ D VL DG+ +V L + +L LR GG V KVF + ++ +
Sbjct: 110 SADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCL-- 167
Query: 258 LNKFVNHFEKWVLYKPPSSRPANSERYLIC 347
+ F F++ ++KP +SR ++E +++C
Sbjct: 168 IRVFEKLFKRVHVWKPAASRLESAEIFVVC 197
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 34.3 bits (75), Expect = 0.072
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +3
Query: 78 ACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQM 257
+ D VL DG+ +V L + +L LR GG V KVF + ++ +
Sbjct: 110 SADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCL-- 167
Query: 258 LNKFVNHFEKWVLYKPPSSRPANSERYLIC 347
+ F F++ ++KP +SR ++E +++C
Sbjct: 168 IRVFEKLFKRVHVWKPAASRLESAEIFVVC 197
>AF078792-4|AAN84813.1| 261|Caenorhabditis elegans Hypothetical
protein Y40D12A.1b protein.
Length = 261
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 9 GPDKSGDVFDKXVVFEISIKCGNACDLVLADGSVDVNGRENEQERL 146
GP GD+ + I K DLV ADGS + G+E E E +
Sbjct: 191 GPSDDGDIEKFTEEYLIKQKLAGTFDLVTADGSTNTQGKEGEIESI 236
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 480 YTHVIFLTNLSTCLSFLIVCDNIF 409
+T +FL N+ TCL FL+V ++F
Sbjct: 911 FTAEVFLQNMITCLGFLVVITSVF 934
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 480 YTHVIFLTNLSTCLSFLIVCDNIF 409
+T +FL N+ TCL FL+V ++F
Sbjct: 884 FTAEVFLQNMITCLGFLVVITSVF 907
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 480 YTHVIFLTNLSTCLSFLIVCDNIF 409
+T +FL N+ TCL FL+V ++F
Sbjct: 911 FTAEVFLQNMITCLGFLVVITSVF 934
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 480 YTHVIFLTNLSTCLSFLIVCDNIF 409
+T +FL N+ TCL FL+V ++F
Sbjct: 884 FTAEVFLQNMITCLGFLVVITSVF 907
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 187 IKISCVSHMIKSKLRRSCS-FSRPLTSTE-PSANTKSHALPHLMLISNTTXLSNTSPDLS 14
I+ SC+ ++ RR CS R T+T+ PS T+S NTT L ++ D+S
Sbjct: 311 IRSSCLPRYVECHRRRRCSRKQRCHTTTQPPSPTTESLPTSTTTYEMNTTSLETSTTDIS 370
>Z54218-2|CAA90956.1| 352|Caenorhabditis elegans Hypothetical
protein F37B12.3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +3
Query: 327 SERYLICFNKLVRPYCN-----DYVNELEKQFKKYYRI-QXXXXXXXXXXXXXXRVYIKS 488
S ++++CF K + + Y NEL Q ++Y + + ++Y+++
Sbjct: 61 SAKHVVCFQKSEKAFPEYYLIFSYTNELYLQNSRFYILYRFFKPNIIFLQNQFEKLYLRN 120
Query: 489 QRLQIRHHST-WICSFTMSTIILSKMIVCN 575
++I+ WIC + + M+VCN
Sbjct: 121 MIIRIQMLDVGWICVGAVRAVYWLVMLVCN 150
>Z93383-9|CAB07630.1| 281|Caenorhabditis elegans Hypothetical
protein F54B8.10 protein.
Length = 281
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 486 FLYTHVIFLTNLSTCLSFLIVCDNIF*TVFPIH*HNH 376
+L + + + L+FLI D + ++FPI HNH
Sbjct: 83 YLLCPTLLCSTVRATLAFLISFDKVLASIFPILHHNH 119
>Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical
protein T10G3.4 protein.
Length = 309
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 507 HHSTWICSFTMSTIIL-SKMIVCNKCLILR 593
H T+ FT+S I+L S +CN CL+LR
Sbjct: 39 HSKTFHPFFTLSFILLISSYAICNICLLLR 68
>AL021566-2|CAA16502.1| 283|Caenorhabditis elegans Hypothetical
protein F08E10.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 462 LTNLSTCLSFLIVCDNIF*TVFPIH*HNH 376
L + L F+I D IF T FPI HNH
Sbjct: 91 LVTIRPILVFVINLDRIFATYFPILYHNH 119
>Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical
protein F54B8.9 protein.
Length = 286
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 486 FLYTHVIFLTNLSTCLSFLIVCDNIF*TVFPIH*HNH 376
FL + + L FLI D + ++FPI HNH
Sbjct: 83 FLLWPTLICATMRVTLVFLISFDRLMASLFPISYHNH 119
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +3
Query: 219 KVFDAFEHKTIQMLNKFVNHFEK---WVLYKPPSSRPANSE 332
K+F + + ++ML+K V H EK W Y P +R ++E
Sbjct: 501 KIFQTKQARILKMLSKCVTHGEKAALWDEYSPNFARSRSAE 541
>U23452-11|AAK31548.1| 334|Caenorhabditis elegans Hypothetical
protein R07G3.8 protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 48 VFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLRPGGNCVLKVF 227
++ ++ + N CDLVLAD S NG E+ +L D +TQ + + + V +
Sbjct: 49 IYNMAEEVLNDCDLVLADVSSYGNGCYAERNQLKND---SDTQALKVLMTKLEPFVARTC 105
Query: 228 DAFEH 242
+EH
Sbjct: 106 SYYEH 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,009,484
Number of Sequences: 27780
Number of extensions: 255014
Number of successful extensions: 727
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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