Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4n18
         (274 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   2.7  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    22   3.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    22   4.7  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    21   8.3  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    21   8.3  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 167 GICSSIIGYHWIPKMGRRSN 226
           G CSS+ G  W P  G + N
Sbjct: 733 GRCSSVSGGDWSPMGGDQQN 752


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 167 GICSSIIGYHWIPKMGRRSNYVINESQKLLMISKKK 274
           G C   IG    PK+  R+  +  + Q+LLMI   K
Sbjct: 501 GTCRIFIG----PKVDERNTGLTMDEQRLLMIELDK 532


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -1

Query: 241 FINYIVRTPSHLRNPMISDNARTYPNVPIMLVFF*GIIMMLKLKAKVFR 95
           F+N  V    H R P   D+ + Y N+  + +F   + M+LK+ +  F+
Sbjct: 496 FLNTGVLATEHYRQPPWLDDFQEYTNMFFVALF--TMEMLLKMYSLGFQ 542


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 16  SYNGYPT 36
           SYNGYPT
Sbjct: 246 SYNGYPT 252


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 16  SYNGYPT 36
           SYNGYPT
Sbjct: 246 SYNGYPT 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,478
Number of Sequences: 2352
Number of extensions: 4556
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15730956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)