Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4n08
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.5  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    21   7.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/37 (21%), Positives = 24/37 (64%)
 Frame = +1

Query: 493 FDSNVSQEILVENNNSSIDETITRHHITIGTQTPNIL 603
           +DS++ Q+I+ +N     +++ T+H+  + T+  +++
Sbjct: 113 YDSDIIQDIVPQNVLDEEEKSSTKHYAALLTERSSLV 149


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 372 LFLQKLVKYSNIYGTAPFFRY 310
           +F+  LVKY NI+   P++ +
Sbjct: 13  VFINPLVKYLNIFFITPWYDF 33


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 127 NMLRNWSTSIPEGQEN 174
           N   NW    PEG+ N
Sbjct: 22  NFTPNWGKRAPEGESN 37


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 310 FMLMFDTCVFTNV 272
           FM+   TC++TN+
Sbjct: 178 FMIFTSTCIYTNL 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,583
Number of Sequences: 336
Number of extensions: 3753
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)