Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4n08
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069235-1|AAH69235.1|  577|Homo sapiens THAP domain containing ...    46   2e-04
AF258556-1|AAG23759.1|  577|Homo sapiens PP238 protein.                46   2e-04
AC133528-4|AAY14918.1|  577|Homo sapiens unknown protein.              46   2e-04
CR533485-1|CAG38516.1|  228|Homo sapiens DKFZP564I0422 protein.        40   0.007
BC008358-1|AAH08358.1|  228|Homo sapiens THAP domain containing,...    40   0.007
BC131722-1|AAI31723.1|  102|Homo sapiens THAP9 protein protein.        35   0.26 
BC012182-1|AAH12182.1|  313|Homo sapiens THAP domain containing ...    31   4.2  

>BC069235-1|AAH69235.1|  577|Homo sapiens THAP domain containing 4
           protein.
          Length = 577

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +2

Query: 140 IGVHQFP-KDKKIGRLWLKVI*REXSTPTKSSRLCR*HFVESDYENISKYTGVKHQHKYL 316
           +  H+FP KD K    WLK + R+  TPTK S LC  HF +  +        ++ QH+ L
Sbjct: 22  VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76

Query: 317 KKGAVPYI 340
           K  AVP I
Sbjct: 77  KPTAVPSI 84


>AF258556-1|AAG23759.1|  577|Homo sapiens PP238 protein.
          Length = 577

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +2

Query: 140 IGVHQFP-KDKKIGRLWLKVI*REXSTPTKSSRLCR*HFVESDYENISKYTGVKHQHKYL 316
           +  H+FP KD K    WLK + R+  TPTK S LC  HF +  +        ++ QH+ L
Sbjct: 22  VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76

Query: 317 KKGAVPYI 340
           K  AVP I
Sbjct: 77  KPTAVPSI 84


>AC133528-4|AAY14918.1|  577|Homo sapiens unknown protein.
          Length = 577

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +2

Query: 140 IGVHQFP-KDKKIGRLWLKVI*REXSTPTKSSRLCR*HFVESDYENISKYTGVKHQHKYL 316
           +  H+FP KD K    WLK + R+  TPTK S LC  HF +  +        ++ QH+ L
Sbjct: 22  VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76

Query: 317 KKGAVPYI 340
           K  AVP I
Sbjct: 77  KPTAVPSI 84


>CR533485-1|CAG38516.1|  228|Homo sapiens DKFZP564I0422 protein.
          Length = 228

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 25/72 (34%), Positives = 38/72 (52%)
 Frame = +2

Query: 140 IGVHQFPKDKKIGRLWLKVI*REXSTPTKSSRLCR*HFVESDYENISKYTGVKHQHKYLK 319
           I  H+FP D K  + W++++ R+   P K + LC  HF  S ++     TG   Q + LK
Sbjct: 20  ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD----LTG---QTRRLK 72

Query: 320 KGAVPYILEYLT 355
             AVP I ++ T
Sbjct: 73  MDAVPTIFDFCT 84


>BC008358-1|AAH08358.1|  228|Homo sapiens THAP domain containing,
           apoptosis associated protein 2 protein.
          Length = 228

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 25/72 (34%), Positives = 38/72 (52%)
 Frame = +2

Query: 140 IGVHQFPKDKKIGRLWLKVI*REXSTPTKSSRLCR*HFVESDYENISKYTGVKHQHKYLK 319
           I  H+FP D K  + W++++ R+   P K + LC  HF  S ++     TG   Q + LK
Sbjct: 20  ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD----LTG---QTRRLK 72

Query: 320 KGAVPYILEYLT 355
             AVP I ++ T
Sbjct: 73  MDAVPTIFDFCT 84


>BC131722-1|AAI31723.1|  102|Homo sapiens THAP9 protein protein.
          Length = 102

 Score = 35.1 bits (77), Expect = 0.26
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
 Frame = +2

Query: 140 IGVHQFPKDKKIGRLWLKVI*R------EXSTPTKSSRLCR*HFVESDYENISKYTGVKH 301
           +  HQFP D      W++ + R      +   P   + LC  HF ESD+E+     G++ 
Sbjct: 23  LSFHQFPTDTIQRSKWIRAVNRVDPRSKKIWIPGPGAILCSKHFQESDFESY----GIRR 78

Query: 302 QHKYLKKGAVPYILEY 349
           +   LKKGAVP +  Y
Sbjct: 79  K---LKKGAVPSVSLY 91


>BC012182-1|AAH12182.1|  313|Homo sapiens THAP domain containing 11
           protein.
          Length = 313

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
 Frame = +2

Query: 149 HQFPKDKKIGRLWLKVI*RE-----XST--PTKSSRLCR*HF 253
           + FPKD ++ RLWLK + R       ST  PT   RLC  HF
Sbjct: 24  YTFPKDAELRRLWLKNVSRAGVSGCFSTFQPTTGHRLCSVHF 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,053,574
Number of Sequences: 237096
Number of extensions: 2010350
Number of successful extensions: 3477
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3476
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)