Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4n06
         (206 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   0.44 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   2.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    19   5.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   5.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    19   7.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    19   7.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   7.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    18   9.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 0.44
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 138 CRRVNHSKQCN**CNHYDYT 79
           C+R+ + KQC   C   DY+
Sbjct: 788 CKRIYNEKQCCKNCARVDYS 807


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 90  YDYTYRTLIGIITAVVTLV 34
           ++   RT++G+  AV+T +
Sbjct: 312 FELNRRTILGVSNAVITFL 330


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 72  TLIGIITAVVTLV 34
           T++GI+ A+VT +
Sbjct: 331 TILGILDAIVTFL 343


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 72  TLIGIITAVVTLV 34
           T++GI+ A+VT +
Sbjct: 331 TILGILDAIVTFL 343


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 136 AVRSHGYLSLPTARQYKCFK 195
           ++ S GYL   +   YK FK
Sbjct: 66  SLTSFGYLFCASLSFYKAFK 85


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 144 AHCRRVNHSKQCN**CNHYDYTY 76
           A  +R N SKQ +   N Y Y++
Sbjct: 230 ARRKRRNFSKQASEILNEYFYSH 252


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 98  HY*LHCLL*FTRRQC 142
           HY  HC   +T + C
Sbjct: 82  HYTCHCPYGYTGKDC 96


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +1

Query: 22  HNVFDQGYDSGYY 60
           HN + Q Y   YY
Sbjct: 298 HNYYAQNYAPTYY 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,002
Number of Sequences: 336
Number of extensions: 479
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2587224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)