Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4n06
         (206 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    21   4.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    21   5.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    21   5.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    21   7.0  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 60  IITAVVTLVKNVMLKHNNTF 1
           I+T ++  ++N  L+H N F
Sbjct: 202 ILTIIILFLRNRRLRHFNAF 221


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 184 YIDGPSAGTDSRESALPARESQQTMQ 107
           +  GP +GTD        ++SQ   Q
Sbjct: 459 FFRGPDSGTDRHSEKQQQQQSQHQQQ 484


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 184 YIDGPSAGTDSRESALPARESQQTMQ 107
           +  GP +GTD        ++SQ   Q
Sbjct: 459 FFRGPDSGTDRHSEKQQQQQSQHQQQ 484


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 190 NIYIDGPSAGTDSRESALPAR 128
           N  + GP  G   RE + P+R
Sbjct: 384 NFTMPGPGPGIGEREKSNPSR 404


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,042
Number of Sequences: 2352
Number of extensions: 2028
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 46
effective length of database: 455,787
effective search space used: 10027314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)