Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4n03
(362 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 1.9
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 3.4
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 4.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 4.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 4.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 4.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 4.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 4.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 4.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 4.5
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 20 7.8
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 20 7.8
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 1.9
Identities = 10/40 (25%), Positives = 15/40 (37%)
Frame = +3
Query: 12 YETDGGRHYIKSDGRSHRQQYRRYHPSQQLAD*RRSTWPI 131
Y T G H+ G SH +H S + + P+
Sbjct: 409 YSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPL 448
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 253 VTVQKQKYETTLLENYDIRNRN 318
V V++ E +L+N+DI+++N
Sbjct: 580 VDVEEILGEAKVLQNFDIKDKN 601
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.0 bits (42), Expect = 4.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 112 GDQLGQFVNRNRSLI 156
G+Q+ +F+N N L+
Sbjct: 203 GEQMNRFINENSELL 217
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 12 YETDGGRHYIKSDGRSHRQQYRRY 83
Y DG R + R ++++ RRY
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRY 268
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 12 YETDGGRHYIKSDGRSHRQQYRRY 83
Y DG R + R ++++ RRY
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRY 268
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 12 YETDGGRHYIKSDGRSHRQQYRRY 83
Y DG R + R ++++ RRY
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRY 268
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 12 YETDGGRHYIKSDGRSHRQQYRRY 83
Y DG R + R ++++ RRY
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRY 268
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 12 YETDGGRHYIKSDGRSHRQQYRRY 83
Y DG R + R ++++ RRY
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRY 268
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 12 YETDGGRHYIKSDGRSHRQQYRRY 83
Y DG R + R ++++ RRY
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRY 268
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 12 YETDGGRHYIKSDGRSHRQQYRRY 83
Y DG R + R ++++ RRY
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRY 268
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 20.2 bits (40), Expect = 7.8
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = +1
Query: 244 QETVTVQKQKYETTLLENY 300
++++T Q Q+Y+ +E Y
Sbjct: 659 EQSLTYQDQQYQVVSVEQY 677
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 20.2 bits (40), Expect = 7.8
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -3
Query: 144 VSIYKLAKLIAFSRRVVGLDDI 79
++I + ++ FS+R+ G D++
Sbjct: 381 ITILTVQLIVEFSKRLPGFDEL 402
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,632
Number of Sequences: 438
Number of extensions: 1242
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8556345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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