Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4m23
(389 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 77 6e-15
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 77 6e-15
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 77 6e-15
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 77 8e-15
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 77 8e-15
AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 31 0.71
AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 31 0.71
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 31 0.71
AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-P... 29 2.2
Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein. 28 3.8
AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p pro... 28 3.8
AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-P... 28 3.8
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 77.4 bits (182), Expect = 6e-15
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 2 AAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 157
A +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 19 ANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 77.4 bits (182), Expect = 6e-15
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 2 AAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 157
A +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 19 ANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 77.4 bits (182), Expect = 6e-15
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 2 AAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 157
A +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 19 ANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 77.0 bits (181), Expect = 8e-15
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +2
Query: 2 AAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 157
A D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 19 ANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 77.0 bits (181), Expect = 8e-15
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +2
Query: 2 AAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 157
A D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 19 ANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p
protein.
Length = 510
Score = 30.7 bits (66), Expect = 0.71
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -3
Query: 156 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 1
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460
>AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p
protein.
Length = 358
Score = 30.7 bits (66), Expect = 0.71
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -3
Query: 156 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 1
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 30.7 bits (66), Expect = 0.71
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -3
Query: 156 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 1
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630
>AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-PA
protein.
Length = 977
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 14 VEKILSSVGIEADAEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 154
V KIL G++ ++ +K++ +T +GK +LI L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294
>Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein.
Length = 644
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 126 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 1
S P++ S S S+ S +F S SAS S PT T+AAA
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAA 189
>AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p
protein.
Length = 315
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 126 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 1
S P++ S S S+ S +F S SAS S PT T+AAA
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAA 189
>AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-PA
protein.
Length = 644
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 126 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 1
S P++ S S S+ S +F S SAS S PT T+AAA
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAA 189
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,077,151
Number of Sequences: 53049
Number of extensions: 133313
Number of successful extensions: 348
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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