Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4m18
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 202 CNGIHRRDWLCNRKKVGS*RRFSRH 276
           CN I  + W+ NR   G+   F+ H
Sbjct: 910 CNRIRNQRWIVNRDTSGATGPFAYH 934


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -3

Query: 147 VFDIFVFIKDRMNFNLNITLKLP*VEICLNFSTLQTLTRSESERYVINV 1
           +F +FVF       +LNI  ++    + +N S +   TR E + +++ +
Sbjct: 293 LFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLVAI 341


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -3

Query: 147 VFDIFVFIKDRMNFNLNITLKLP*VEICLNFSTLQTLTRSESERYVINV 1
           +F +FVF       +LNI  ++    + +N S +   TR E + +++ +
Sbjct: 293 LFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLVAI 341


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -3

Query: 147 VFDIFVFIKDRMNFNLNITLKLP*VEICLNFSTLQTLTRSESERYVINV 1
           +F +FVF       +LNI  ++    + +N S +   TR E + +++ +
Sbjct: 293 LFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLVAI 341


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 329 DGITVEGIVCHVANSDHRKKLFEVAKSKFGGLDILVSNAAVNPTVS 466
           DGI ++      A+ ++  KL +  K  FG   +L    + NP  S
Sbjct: 139 DGIDIDWEYPANADKENFVKLLQEMKQAFGSKYVLSVTVSANPLPS 184


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 355 NYSFYCNTIAA*AFNCVFN 299
           ++ F CN+     FN VFN
Sbjct: 440 DFPFICNSFTKFEFNTVFN 458


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1

Query: 568 KRRWKHCVYFF 600
           K+RW  C+Y +
Sbjct: 120 KKRWSQCMYMY 130


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1

Query: 568 KRRWKHCVYFF 600
           K+RW  C+Y +
Sbjct: 434 KKRWSQCMYMY 444


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1

Query: 568 KRRWKHCVYFF 600
           K+RW  C+Y +
Sbjct: 667 KKRWSQCMYMY 677


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1

Query: 568 KRRWKHCVYFF 600
           K+RW  C+Y +
Sbjct: 667 KKRWSQCMYMY 677


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,660
Number of Sequences: 336
Number of extensions: 3801
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)