Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4m11
         (323 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p pro...    30   0.60 
AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA...    30   0.60 
J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    26   9.7  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    26   9.7  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    26   9.7  

>AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p
           protein.
          Length = 870

 Score = 30.3 bits (65), Expect = 0.60
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 83  LSGNSGRKHSRCCTSILRKFSGRQH 157
           LSG+S   HSR  T++LRK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
           protein.
          Length = 2139

 Score = 30.3 bits (65), Expect = 0.60
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 83  LSGNSGRKHSRCCTSILRKFSGRQH 157
           LSG+S   HSR  T++LRK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 143 SGRQHCVTVDCCCHGSPH 196
           SGR HCV   C CH  P+
Sbjct: 572 SGRGHCVCGACECHKRPN 589


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 143 SGRQHCVTVDCCCHGSPH 196
           SGR HCV   C CH  P+
Sbjct: 572 SGRGHCVCGACECHKRPN 589


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 143 SGRQHCVTVDCCCHGSPH 196
           SGR HCV   C CH  P+
Sbjct: 572 SGRGHCVCGACECHKRPN 589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,466,971
Number of Sequences: 53049
Number of extensions: 253462
Number of successful extensions: 493
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)