Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4m06
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.    349   2e-96
AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p pro...   349   2e-96
AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA...   349   2e-96
AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p pro...   341   5e-94
AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA...   341   5e-94
L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic r...    31   1.7  
AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA...    31   1.7  
AE014297-3105|AAS65193.1|  178|Drosophila melanogaster CG33335-P...    29   6.8  

>U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.
          Length = 228

 Score =  349 bits (858), Expect = 2e-96
 Identities = 168/198 (84%), Positives = 183/198 (92%)
 Frame = +3

Query: 99  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 278
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 279 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 458
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 459 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 638
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 639 ELINAAKGSSNSYAIKKE 692
           ELINAAKGSSNSYAIKK+
Sbjct: 200 ELINAAKGSSNSYAIKKK 217



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 685 KKKDELERVAKSNR 726
           KKKDELERVAKSNR
Sbjct: 215 KKKDELERVAKSNR 228


>AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p
           protein.
          Length = 228

 Score =  349 bits (858), Expect = 2e-96
 Identities = 168/198 (84%), Positives = 183/198 (92%)
 Frame = +3

Query: 99  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 278
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 279 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 458
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 459 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 638
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 639 ELINAAKGSSNSYAIKKE 692
           ELINAAKGSSNSYAIKK+
Sbjct: 200 ELINAAKGSSNSYAIKKK 217



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 685 KKKDELERVAKSNR 726
           KKKDELERVAKSNR
Sbjct: 215 KKKDELERVAKSNR 228


>AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA
           protein.
          Length = 228

 Score =  349 bits (858), Expect = 2e-96
 Identities = 168/198 (84%), Positives = 183/198 (92%)
 Frame = +3

Query: 99  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 278
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 279 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 458
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 459 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 638
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 639 ELINAAKGSSNSYAIKKE 692
           ELINAAKGSSNSYAIKK+
Sbjct: 200 ELINAAKGSSNSYAIKKK 217



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 685 KKKDELERVAKSNR 726
           KKKDELERVAKSNR
Sbjct: 215 KKKDELERVAKSNR 228


>AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p
           protein.
          Length = 230

 Score =  341 bits (839), Expect = 5e-94
 Identities = 163/206 (79%), Positives = 182/206 (88%)
 Frame = +3

Query: 75  EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 254
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 255 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 434
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 435 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 614
           PLQV V AI+NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWL+CTGAREAAFRNIK
Sbjct: 134 PLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIK 193

Query: 615 TIAECVADELINAAKGSSNSYAIKKE 692
           T+AEC+ADELINAAKGSSNSYAIKK+
Sbjct: 194 TVAECLADELINAAKGSSNSYAIKKK 219



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 685 KKKDELERVAKSNR 726
           KKKDELERVAKSNR
Sbjct: 217 KKKDELERVAKSNR 230


>AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA
           protein.
          Length = 230

 Score =  341 bits (839), Expect = 5e-94
 Identities = 163/206 (79%), Positives = 182/206 (88%)
 Frame = +3

Query: 75  EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 254
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 255 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 434
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 435 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 614
           PLQV V AI+NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWL+CTGAREAAFRNIK
Sbjct: 134 PLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIK 193

Query: 615 TIAECVADELINAAKGSSNSYAIKKE 692
           T+AEC+ADELINAAKGSSNSYAIKK+
Sbjct: 194 TVAECLADELINAAKGSSNSYAIKKK 219



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 685 KKKDELERVAKSNR 726
           KKKDELERVAKSNR
Sbjct: 217 KKKDELERVAKSNR 230


>L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic
           receptor protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -2

Query: 257 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 153
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


>AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA
           protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -2

Query: 257 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 153
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


>AE014297-3105|AAS65193.1|  178|Drosophila melanogaster CG33335-PA
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = +1

Query: 496 SVVRVQFVVKPLMF-HPCAESTKQSGFCAQVHVRLHSEILKQSQSVLQMN*LMQLRVHLT 672
           S   V    KPL++  P     + S +  +VH+     I+ +    + M    Q  +H T
Sbjct: 2   SCQNVALPFKPLLYLKPYMTELRISEYAVEVHIAADDFIILRLFLAISMEYSSQSTLHST 61

Query: 673 PTPSKKKDELERVAK 717
           P  +   + LE VAK
Sbjct: 62  PNSTPFIEPLENVAK 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,520,456
Number of Sequences: 53049
Number of extensions: 711973
Number of successful extensions: 1869
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)