Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4m05
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory
          receptor candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 15 WRSCVRFLLKHVWFL 59
          W   +  +LKHVWFL
Sbjct: 2  WSENITDVLKHVWFL 16


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 472 LIAIRCRTLVPNATRSYFCHQQQR 543
           +IA    TL+   T +Y+ H+Q+R
Sbjct: 385 IIAPLIATLIATVTVNYYRHKQKR 408


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 271 NDHARFLDRRPVIFQKHVVLSH 206
           N H R ++     F  H VL H
Sbjct: 353 NTHKRKIENTSTTFNAHTVLIH 374


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +3

Query: 594 SCKSAGVCSSAGQQMDC 644
           +CK+ G C   G+   C
Sbjct: 152 TCKNGGTCQDLGKTFMC 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,497
Number of Sequences: 336
Number of extensions: 3149
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)