BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4l14
(383 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK090988-1|BAC03563.1| 151|Homo sapiens protein ( Homo sapiens ... 31 0.96
M36109-1|AAA36465.1| 369|Homo sapiens protein ( Human placental... 28 8.9
M32402-1|AAA36464.1| 369|Homo sapiens protein ( Human placental... 28 8.9
BC111782-1|AAI11783.1| 369|Homo sapiens placental protein 11, p... 28 8.9
BC074763-1|AAH74763.1| 369|Homo sapiens 26 serine protease prot... 28 8.9
BC069715-1|AAH69715.1| 369|Homo sapiens 26 serine protease prot... 28 8.9
>AK090988-1|BAC03563.1| 151|Homo sapiens protein ( Homo sapiens
cDNA FLJ33669 fis, clone BRAMY2028740. ).
Length = 151
Score = 31.5 bits (68), Expect = 0.96
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +2
Query: 23 APKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYF 127
A +S+ F++NC +L ++ + +K +C +N+ Y+
Sbjct: 104 ASQSDDFIFIFNCINLHLDNDFVKGVCCVQNLRYW 138
>M36109-1|AAA36465.1| 369|Homo sapiens protein ( Human placental
protein 11 (PP11) mRNA. ).
Length = 369
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 137 YNAPTVLKAQPAVYDAFIKHSELFINAICQ 226
Y+APT Q Y+AF KH + NA CQ
Sbjct: 43 YSAPT--SCQGRCYEAFDKHHQCHCNARCQ 70
>M32402-1|AAA36464.1| 369|Homo sapiens protein ( Human placental
protein (PP11) mRNA, complete cds. ).
Length = 369
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 137 YNAPTVLKAQPAVYDAFIKHSELFINAICQ 226
Y+APT Q Y+AF KH + NA CQ
Sbjct: 43 YSAPT--SCQGRCYEAFDKHHQCHCNARCQ 70
>BC111782-1|AAI11783.1| 369|Homo sapiens placental protein 11,
precursor protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 137 YNAPTVLKAQPAVYDAFIKHSELFINAICQ 226
Y+APT Q Y+AF KH + NA CQ
Sbjct: 43 YSAPT--SCQGRCYEAFDKHHQCHCNARCQ 70
>BC074763-1|AAH74763.1| 369|Homo sapiens 26 serine protease
protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 137 YNAPTVLKAQPAVYDAFIKHSELFINAICQ 226
Y+APT Q Y+AF KH + NA CQ
Sbjct: 43 YSAPT--SCQGRCYEAFDKHHQCHCNARCQ 70
>BC069715-1|AAH69715.1| 369|Homo sapiens 26 serine protease
protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 137 YNAPTVLKAQPAVYDAFIKHSELFINAICQ 226
Y+APT Q Y+AF KH + NA CQ
Sbjct: 43 YSAPT--SCQGRCYEAFDKHHQCHCNARCQ 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,009,273
Number of Sequences: 237096
Number of extensions: 775711
Number of successful extensions: 2143
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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