Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4l14
         (383 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004873-1|AAO45229.1|  573|Drosophila melanogaster LD22866p pro...    29   2.7  
AE014298-1318|AAF46477.2|  573|Drosophila melanogaster CG15797-P...    29   2.7  
AY069437-1|AAL39582.1|  357|Drosophila melanogaster LD14783p pro...    27   6.3  
AE014296-3003|AAF49276.1|  357|Drosophila melanogaster CG7341-PB...    27   6.3  
AE014296-3002|AAN11682.1|  357|Drosophila melanogaster CG7341-PA...    27   6.3  
AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA...    27   8.4  

>BT004873-1|AAO45229.1|  573|Drosophila melanogaster LD22866p
           protein.
          Length = 573

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 236 KQQVNNFCLDELVKLKLIAIKHLCALEY 319
           +Q +   CLD ++K    +++H CALEY
Sbjct: 151 RQCLRQHCLDAILKRVASSMRHPCALEY 178


>AE014298-1318|AAF46477.2|  573|Drosophila melanogaster CG15797-PA
           protein.
          Length = 573

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 236 KQQVNNFCLDELVKLKLIAIKHLCALEY 319
           +Q +   CLD ++K    +++H CALEY
Sbjct: 151 RQCLRQHCLDAILKRVASSMRHPCALEY 178


>AY069437-1|AAL39582.1|  357|Drosophila melanogaster LD14783p
           protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +2

Query: 167 PAVYDAFIKHSELFINAICQMDEKQQV--NNFC 259
           P +YDA   HS++F+ ++C +DE+ ++    FC
Sbjct: 15  PKLYDA---HSKVFLTSLCDVDEQLKLLPRRFC 44


>AE014296-3003|AAF49276.1|  357|Drosophila melanogaster CG7341-PB,
           isoform B protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +2

Query: 167 PAVYDAFIKHSELFINAICQMDEKQQV--NNFC 259
           P +YDA   HS++F+ ++C +DE+ ++    FC
Sbjct: 15  PKLYDA---HSKVFLTSLCDVDEQLKLLPRRFC 44


>AE014296-3002|AAN11682.1|  357|Drosophila melanogaster CG7341-PA,
           isoform A protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +2

Query: 167 PAVYDAFIKHSELFINAICQMDEKQQV--NNFC 259
           P +YDA   HS++F+ ++C +DE+ ++    FC
Sbjct: 15  PKLYDA---HSKVFLTSLCDVDEQLKLLPRRFC 44


>AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA
            protein.
          Length = 1364

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 107  TKNIAYFTERYNAPTVLKAQPAV 175
            T+N++   E Y+ PT+L  QP+V
Sbjct: 1252 TRNLSAIFEDYDGPTILMQQPSV 1274


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,498,651
Number of Sequences: 53049
Number of extensions: 248262
Number of successful extensions: 482
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)