Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4l08
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 34 0.14
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 33 0.24
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 32 0.56
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 0.74
03_02_0253 - 6839543-6839623,6839725-6839805,6839935-6839976,684... 31 0.98
02_02_0691 + 12999452-12999820 31 0.98
11_06_0610 - 25449085-25453284 30 1.7
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 30 1.7
02_04_0452 + 23044190-23045227 29 3.0
02_01_0302 - 2021221-2023305 29 3.0
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.0
01_05_0227 - 19512866-19514983 29 5.2
04_01_0041 - 464695-464850,467485-469029 28 6.9
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 6.9
02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757 28 6.9
12_02_0985 + 25052753-25053691 28 9.2
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 28 9.2
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 9.2
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 28 9.2
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 276 PPSPAISATS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 446
P SP+ S TS + S ++PT+P TS +P +P +P P PS
Sbjct: 1761 PTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHA 1820
Query: 447 LTPSSLGMAKGVSPPY 494
+PSS SP Y
Sbjct: 1821 YSPSSPNYYSSTSPTY 1836
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 33.1 bits (72), Expect = 0.24
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +3
Query: 276 PPSPAISATS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 446
P SP+ S TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1699 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHA 1758
Query: 447 LTPSS--LGMAKGVSPPY 494
+PSS L SP Y
Sbjct: 1759 YSPSSPRLSPYSQTSPNY 1776
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 270 IKPPSPAISATSTR-SSNPR--FHTPTTPDLTSISINPLTP 383
I PPSPA + S+R S +PR F TP T T+ S +P +P
Sbjct: 25 ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 288 AISATSTRSSNPRFHTPTTP 347
A S+T+TR S PR H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>03_02_0253 -
6839543-6839623,6839725-6839805,6839935-6839976,
6840604-6840695,6840789-6840858,6841645-6841737,
6841926-6842002,6842614-6842800
Length = 240
Score = 31.1 bits (67), Expect = 0.98
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 221 ATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEG-I 397
+TP +R I G + H AT+ L N +KS + ++FH+ PD V+E I
Sbjct: 132 STPEEARKFIKGYSESHAATIGSVL-VTN--VKSGARKEGWDKAEVYFHKIPDEVVESLI 188
Query: 398 RAGVKASVVIRGSISVSHPLVT 463
G + G + V HPL +
Sbjct: 189 EEG--DVFYVAGGLLVEHPLTS 208
>02_02_0691 + 12999452-12999820
Length = 122
Score = 31.1 bits (67), Expect = 0.98
Identities = 27/84 (32%), Positives = 31/84 (36%)
Frame = -3
Query: 490 GGETPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWNRGFDD 311
G E P+ P G R A G+ G P A G RG E +S G
Sbjct: 11 GSEAPVVAPKPRGWRMAVGSIGGGGISPPVARG---GRRGERERGRRSA-----GGGLTG 62
Query: 310 RVDVAEIAGEGGLMHKGETANSNA 239
VD AGE G H G A + A
Sbjct: 63 AVDAFRPAGEAGRQHAGAAAAAEA 86
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 PPSPAISATSTRSSNPRFHTPTTPDLTSIS-INPLTPY*KEFAPGLKPPLSSE 431
PP+P A+S P HTP+ P+ T S +P TP K +P PP + E
Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP---PPPTPE 667
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 PPSPAISATSTRSSNPRFHTPTTPDLT-SISINPLTPY*KEFAPGLKPPLSSE 431
PP+P A+S P HTP+ P T +P TP + +P PP + E
Sbjct: 651 PPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSP---PPPAPE 700
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 276 PPSPAISATSTRSSNPRFHTPT---TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY 446
PPSP+I + T +TPT TP S +P TP + P + +PS+
Sbjct: 105 PPSPSIGTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPG-GGCSSSPTPCDAPPSPSSD 163
Query: 447 LTPSSLGMAKGVSP 488
+P++ G G SP
Sbjct: 164 TSPTTPGGGGGYSP 177
Score = 27.9 bits (59), Expect = 9.2
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = +3
Query: 267 CIKPPSPAISATSTRSSNPRFHTPT---TPDLTSISINPLTPY*KEFAPGLKPPLSSEA- 434
C PPSP+ + T ++PT TP S +P TP G P S+A
Sbjct: 154 CDAPPSPSSDTSPTTPGGGGGYSPTPSDTPPSPSSDTSPTTP----GGGGGYTPTPSDAP 209
Query: 435 --PSAYLTPSSLGMAKGVSP 488
PS+ +P++ G G +P
Sbjct: 210 PSPSSDTSPTTPGGGGGYTP 229
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 223 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPP 345
H +L H+ +A SH SR H P + P S PP
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTS--ISINPLTPY*KE-----FA--PGLKPPLSSE 431
PSP S+T+ S +P TPT P S ++ P P + FA PG P+ S
Sbjct: 519 PSPPSSSTAPPSHSPPQSTPTHPSYPSPPVTYTPPPPTSADRPDVRFAPPPGSYGPIPST 578
Query: 432 APSAYLTPSSLGMAKGVSPP 491
PS+ PS + G PP
Sbjct: 579 PPSSGSPPSP---SSGYQPP 595
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 26 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 199
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 200 VEGVNVLATPSSSRITIGGLALMHQ 274
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 204 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 112
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPVTVD 172
R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V +D
Sbjct: 45 RPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAVPLD 102
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/72 (27%), Positives = 26/72 (36%)
Frame = +3
Query: 276 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 455
PP+P + + RF T +TPD ++ P AP PP P P
Sbjct: 307 PPAPPPARSRRTPPRTRFSTGSTPDTKQVTSPSPRPVQPSNAPPPPPPPPPPPPPP--PP 364
Query: 456 SSLGMAKGVSPP 491
L A PP
Sbjct: 365 PKLNTAPKPPPP 376
>02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757
Length = 397
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +3
Query: 276 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 455
PP P+ SATS S+ PTT +S + + P + AP A + TP
Sbjct: 139 PPPPSSSATSAASNTSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGGPYAAATARTP 198
Query: 456 SSLGMAKGVSPPYFQVN 506
++ VSP + Q++
Sbjct: 199 AAAAYHAQVSPFHLQLD 215
>12_02_0985 + 25052753-25053691
Length = 312
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 267 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTASRLTRYASR*P 88
+ +R + +R D S+ + +T S + S + GAEG TTAS LT S P
Sbjct: 127 VSSRTGLFLRGDCHRNSSASNATNCSIPAETMSRMVPTASCGAEGNTTASALTCVTSTSP 186
>06_01_0018 +
194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLT 356
PSP +A TRSS+ R H TP T
Sbjct: 9 PSPTSTARETRSSSARGHASPTPTPT 34
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 541 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 630
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAP 404
P+P ++A S+R NP PD+T+ ++ + Y + +P
Sbjct: 447 PAPVMAAFSSRGPNPITPQILKPDITAPGVSVIAAYSEAVSP 488
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,114,969
Number of Sequences: 37544
Number of extensions: 479650
Number of successful extensions: 1584
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1580
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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