Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4l08
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 33 0.83
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 33 1.1
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 33 1.1
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 33 1.1
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 33 1.1
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 33 1.1
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 33 1.1
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 32 1.9
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 32 1.9
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 32 1.9
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 32 1.9
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 32 1.9
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 32 1.9
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 32 1.9
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 32 1.9
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 32 1.9
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 32 1.9
CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein. 31 4.5
BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein. 31 4.5
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 5.9
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 5.9
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 5.9
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 5.9
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 5.9
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 5.9
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 5.9
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 5.9
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 5.9
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 5.9
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 5.9
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 33.5 bits (73), Expect = 0.83
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP+ + P
Sbjct: 399 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPIPASTPH 457
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 458 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 488
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 270 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 431
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSSEAPSA 443
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 324
Query: 444 YLTP 455
TP
Sbjct: 325 TATP 328
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 270 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 431
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 178 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSSEAPSA 443
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAR 324
Query: 444 YLTP 455
TP
Sbjct: 325 TATP 328
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 270 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 431
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSSEAPSA 443
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 270 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 328
Query: 444 YLTP 455
TP
Sbjct: 329 TATP 332
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 738
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 487
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 738
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 738
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 738
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 487
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 208 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 348
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 1078 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 1136
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 1137 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1167
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 653 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 711
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 712 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 742
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 870 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 928
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 929 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 959
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 279 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 440
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 441 AYLTPSSLGMAKGVS--PPYFQVNDESQASR 527
+TP G + +S P+ V+D S R
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 487
>CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein.
Length = 931
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 318 NPRFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PLSSEAPSAYLTPSSLGMAKGVSPP 491
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein.
Length = 798
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 318 NPRFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PLSSEAPSAYLTPSSLGMAKGVSPP 491
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 157
+L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 37 KLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 157
+L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 95 KLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 30.7 bits (66), Expect = 5.9
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +3
Query: 279 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSA 443
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 898 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 957
Query: 444 YLTPSSLGMAKGVSPP 491
TPS + PP
Sbjct: 958 TTTPSPPTITTTTPPP 973
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 30.7 bits (66), Expect = 5.9
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +3
Query: 279 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSA 443
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 181 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 240
Query: 444 YLTPSSLGMAKGVSPP 491
TPS + PP
Sbjct: 241 TTTPSPPTITTTTPPP 256
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.7 bits (66), Expect = 5.9
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +3
Query: 279 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSA 443
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 1523 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1582
Query: 444 YLTPSSLGMAKGVSPP 491
TPS + PP
Sbjct: 1583 TTTPSPPTITTTTPPP 1598
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 157
+L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 37 KLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 157
+L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 37 KLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 157
+L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 37 KLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 157
+L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 48 KLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 157
+L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 37 KLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 2 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 157
+L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 48 KLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,464,713
Number of Sequences: 237096
Number of extensions: 2395877
Number of successful extensions: 6971
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6948
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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