Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4l03
(360 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 25 0.18
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 0.72
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 22 1.7
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 22 2.2
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 2.9
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 3.8
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 20 8.8
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 20 8.8
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 20 8.8
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 20 8.8
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 25.4 bits (53), Expect = 0.18
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 85 LFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCA-LYIMIATVWSL 219
LF + +SF + L +L+ F+SFM + L+ +A+ W L
Sbjct: 73 LFCASLSFYKAFKIGILLNQLITPLFFFHSFMTSVLFSQVASRWPL 118
Score = 21.4 bits (43), Expect = 2.9
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +3
Query: 75 YGYIVCFSYEFYYCYGFRMFENE 143
+GY+ C S FY + + N+
Sbjct: 70 FGYLFCASLSFYKAFKIGILLNQ 92
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.4 bits (48), Expect = 0.72
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Frame = +1
Query: 13 LILLGHXMGAYTDY----------RYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSL 162
LILL +G Y Y + K+C +VI+F ++ ++ K L D L
Sbjct: 13 LILLSLLLGLYPSYLQTVGKCQRLKTDKNCTIVIIFHLILFAVLLYFASLEKNPLFDGQL 72
Query: 163 -MFNSFMCALYIMIA 204
FN+F L +++
Sbjct: 73 YSFNTFAKLLIFVVS 87
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 22.2 bits (45), Expect = 1.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 354 FYKLLFIFYVIHYNVRERWR 295
F KLL Y I+YN +E R
Sbjct: 115 FGKLLINLYTINYNFKESER 134
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.8 bits (44), Expect = 2.2
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 69 MLYGYIVCFSYEFYYCY 119
M YI CF YY Y
Sbjct: 1 MFLAYIACFLLLLYYIY 17
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.4 bits (43), Expect = 2.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 208 VWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 309
++SL+ LT Y ++ PF P PF+
Sbjct: 283 IFSLRPGLTHKYTHEIKLHDKTPFLKRPYPVPFA 316
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.0 bits (42), Expect = 3.8
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = -1
Query: 210 HCCNHNVQSAHKRVKHQTAIN 148
H H++ + H V H A N
Sbjct: 324 HHAGHHIHAQHHVVNHHVAAN 344
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 19.8 bits (39), Expect = 8.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 222 F*RPHCCNHNVQSAHKR 172
F PH C+ N+QS R
Sbjct: 343 FRMPHRCHGNLQSCPTR 359
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 19.8 bits (39), Expect = 8.8
Identities = 4/13 (30%), Positives = 11/13 (84%)
Frame = -2
Query: 224 FFKDHTVAIIMYK 186
FF+DH + +++++
Sbjct: 52 FFRDHKLLLVLFR 64
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 19.8 bits (39), Expect = 8.8
Identities = 4/13 (30%), Positives = 11/13 (84%)
Frame = -2
Query: 224 FFKDHTVAIIMYK 186
FF+DH + +++++
Sbjct: 52 FFRDHKLLLVLFR 64
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 19.8 bits (39), Expect = 8.8
Identities = 4/13 (30%), Positives = 11/13 (84%)
Frame = -2
Query: 224 FFKDHTVAIIMYK 186
FF+DH + +++++
Sbjct: 52 FFRDHKLLLVLFR 64
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,090
Number of Sequences: 336
Number of extensions: 1356
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7299165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -